RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 H3BUX3 64 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 DNAL4O96015 105 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 COL8A2P25067 703 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 BRD3OSQ6XYD6 125 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 STHQ8IWL8 128 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
NOD1-201ENST00000222823 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 F2Z2F3 143 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 OVOL1O14753 267 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 TCRAP04437 139 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 PCNX3Q9H6A9 2034 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 M0R1W7 72 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 NDUFA3O95167 84 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 HIST1H2BLQ99880 126 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 VCX2Q9H322 139 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 JKAMPQ9P055 326 aa9.39□□□□□ -0.91
NOD1-201ENST00000222823 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
NOD1-201ENST00000222823 ATP5L2Q7Z4Y8 100 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 E7EQL1 145 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 H3BRM9 83 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 APOMO95445 188 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 GZMBP10144 247 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 MLANAQ16655 118 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 JMJD8Q96S16 334 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 LAMTOR2Q9Y2Q5 125 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 LINC00587B1AMM8 73 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 UBE2CO00762 179 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 HTN3P15516 51 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 PLA2G5P39877 138 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.91
NOD1-201ENST00000222823 SPSB3Q6PJ21 355 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 MED13Q9UHV7 2174 aa9.38□□□□□ -0.91
NOD1-201ENST00000222823 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 ALKBH7Q9BT30 221 aaPredicted RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 PTPN13Q12923 2485 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 PRTN3P24158 256 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
NOD1-201ENST00000222823 GFI1BQ5VTD9 330 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 NIT1Q86X76 327 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 C9JQL5 133 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 LMO1P25800 156 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 CACNG7P62955 275 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 CYB5R2Q6BCY4 276 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 WFDC12Q8WWY7 111 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
NOD1-201ENST00000222823 ITGB1BP1O14713 200 aa9.36□□□□□ -0.91
NOD1-201ENST00000222823 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
NOD1-201ENST00000222823 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
NOD1-201ENST00000222823 TMEM190Q8WZ59 177 aa9.36□□□□□ -0.91
NOD1-201ENST00000222823 HIST3H2BBQ8N257 126 aa9.36□□□□□ -0.91
NOD1-201ENST00000222823 TRAV8-1A0A0A6YYK1 113 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 K7ENP7 123 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 EVI2AP22794 236 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 AMBPP02760 352 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 ZNF688P0C7X2 276 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 TMEM155Q4W5P6 130 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 SELENOKQ9Y6D0 94 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 PRR30Q53SZ7 412 aaPredicted RBP9.35□□□□□ -0.91
NOD1-201ENST00000222823 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
NOD1-201ENST00000222823 DPM2O94777 84 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 ZNF138P52744 262 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 Q6ZR03 302 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 CRIM1Q9NZV1 1036 aa9.35□□□□□ -0.91
NOD1-201ENST00000222823 C9orf139Q6ZV77 190 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 Q8NFD4 153 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 LY96Q9Y6Y9 160 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 TRGV11A0A075B6L2 103 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 DTX1Q86Y01 620 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 IGFL3Q6UXB1 125 aa9.34□□□□□ -0.91
NOD1-201ENST00000222823 A0A1W2PPI3 338 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
NOD1-201ENST00000222823 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 SAA4P35542 130 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 NDPQ00604 133 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 Q8TAT8 98 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 LRP4O75096 1905 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 TNFSF13O75888 250 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 CNTFRP26992 372 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 LYZL1Q6UWQ5 148 aa9.33□□□□□ -0.92
NOD1-201ENST00000222823 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms