RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Olfr573-ps1A0A1B0GRU2 297 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Akirin2B1AXD8 201 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Prkar2aP12367 401 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 P18525 117 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hist1h1eP43274 219 aaKnown RBP13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Isoc2aP85094 206 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Sdhaf2Q8C6I2 164 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Mrpl51Q9CPY1 128 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Cldn23Q9D7D7 296 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ros1Q78DX7 2340 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ighv5-2A0A0A6YVX8 117 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm10638F6QEG2 257 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ldlrad2Q3V0V0 142 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Trdv4Q5R1A3 115 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr358Q7TRY5 330 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hes7Q8BKT2 225 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Wasf3Q8VHI6 501 aa13.12□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ptprz1B9EKR1 2312 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Rpp21Q8R040 150 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Acaa1bQ8VCH0 424 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Mrpl42Q9CPV3 142 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Rnaseh2cQ9CQ18 166 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Fam210bQ9D8B6 190 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ube2j1Q9JJZ4 318 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm17669F6QL70 154 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Poc1aQ8JZX3 405 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr860Q8VFF7 317 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1444Q8VFX2 319 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 HaghQ99KB8 309 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Glo1Q9CPU0 184 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Slc50a1Q9CXK4 221 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 SelenofQ9ERR7 162 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Sult1b1Q9QWG7 299 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hsf4Q9R0L1 492 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Trbv5A0A0B4J1G9 113 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Q0VG49 157 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Lyplal1Q3UFF7 239 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Lclat1Q3UN02 376 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Vdac1Q60932 296 aaKnown RBP13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ypel2Q65Z95 119 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gal3st2Q6XQH0 394 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tmem204Q7TQI0 226 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ell3Q80VR2 395 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Wipf1Q8K1I7 493 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Pla2g16Q8R3U1 162 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr129Q8VEY1 330 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Mrpl18Q9CQL5 180 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tmem126aQ9D8Y1 196 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ypel1Q9ESC7 118 aa13.11□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1329L7MTV4 313 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ninj1O70131 152 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 LgalslbQ7TPX9 165 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr153Q7TR48 307 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr907Q7TRC7 310 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr355Q8VFP6 310 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Rnf126Q91YL2 313 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm21778A0A087WNP8 232 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ighv1-36A0A0A6YXT2 117 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ighv1-67A0A0G2JFN9 117 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1098A2AVB0 315 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 H60bB1B212 251 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Vmn1r160E9Q346 307 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Vmn1r123L7N270 307 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gpr12P35412 334 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Defa11P50709 85 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Ube2kP61087 200 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Q8BG31 207 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Fbxl17Q9QZN1 701 aa13.1□□□□□ -0.31
Trim39-203ENSMUST00000113706 Smg1Q8BKX6 3658 aaKnown RBP13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Iglv1A0A075B663 117 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Pla2g2cP48076 150 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Stoml3Q6PE84 287 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Vmn1r66Q8K4I0 310 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1269Q8VEZ2 309 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr1265Q8VEZ3 309 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Mrpl30Q9D7N6 160 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Prr30Q9D9B7 401 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Nek7Q9ES74 302 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hspb7P35385 169 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 ElobP62869 118 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Npy6rQ61212 371 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 EnkurQ6SP97 255 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Il22ra2Q80XF5 230 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Prss45Q8K4I7 317 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 HpxQ91X72 460 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr661Q99NH4 319 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gar1Q9CY66 231 aaKnown RBP13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Prss37Q9DAA4 237 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Klhl8P59280 629 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Tcf15Q60756 195 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Olfr770Q8VGC2 311 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Hnf4gQ9WUU6 408 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Supt4h1bQ9Z199 117 aa13.09□□□□□ -0.31
Trim39-203ENSMUST00000113706 Gm14548E9Q1Z6 680 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Fabp9O08716 132 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 PjvkQ0ZLH2 352 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Defb33Q30KN3 62 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Ifna13Q80SU4 189 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Q80VP5 184 aa13.08□□□□□ -0.32
Trim39-203ENSMUST00000113706 Gm10666K7N6B8 321 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms