RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Rwdd2bQ99M03 290 aa9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Fkbp11Q9D1M7 201 aa9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Mettl26Q9DCS2 204 aa9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cd5lQ9QWK4 352 aa9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 SrrQ9QZX7 339 aa9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Arpc1bQ9WV32 372 aaKnown RBP9.45□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr1121L7MTT1 314 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr191L7N1Z8 309 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 DhodhO35435 395 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Zfp11P10751 647 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 GferP56213 198 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 CtdsplP58465 276 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Arpc4P59999 168 aaKnown RBP9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ucp2P70406 309 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 ClcP97400 68 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Klra4Q60651 263 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr901Q7TRD1 311 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ifna13Q80SU4 189 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Kctd9Q80UN1 339 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gpr137Q80ZU9 396 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Harbi1Q8BR93 349 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Rer1Q9CQU3 196 aaKnown RBP9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Hacd1Q9QY80 281 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 HraslsQ9QZU4 167 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cx3cr1Q9Z0D9 354 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Vmn1r61W4VSP5 300 aa9.44□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 PrkdcP97313 4128 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Dnah14A0A140LIJ4 4489 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Trav18A0A075B656 109 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm21117A0A087WPJ9 222 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm20937A0A087WQA3 222 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm21258A0A087WQC7 222 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Trav7-5A0A0G2JFX6 112 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Skint2A7XUX6 400 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ccnb1ip1D3Z3K2 276 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cd209gD3Z5D4 194 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr467L7N455 308 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ucp1P12242 307 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Rps16P14131 146 aaKnown RBP9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Chrna7P49582 502 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cks2P56390 79 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Tff1Q08423 87 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Npy4rQ61041 375 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Sox19Q62249 55 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ccl12Q62401 104 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Sat2Q6P8J2 170 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 TpppQ7TQD2 218 aaKnown RBP9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr1137Q7TR40 310 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Mettl21eQ8CDZ2 244 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 TprkbQ8QZZ7 175 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr993Q8VF75 314 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Isoc1Q91V64 297 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 9230104L09RikQ9D264 133 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Il36bQ9D6Z6 183 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Arpc1aQ9R0Q6 370 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Pus1Q9WU56 423 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cxcl14Q9WUQ5 99 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Pf4Q9Z126 105 aa9.43□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm20824A0A087WS97 222 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ren2P00796 401 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ins2P01326 110 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Cxcl1P12850 96 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Samt2Q497M0 247 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Mef2aQ60929 498 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Tmem11Q8BK08 190 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Scrt2Q8BTH6 311 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Slc1a7Q8JZR4 559 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Tram1Q91V04 374 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Clvs1Q9D4C9 354 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Acox3Q9EPL9 700 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Rab9aQ9R0M6 201 aa9.42□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr1255A2AUA4 310 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm17657E9PWY5 170 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm20715E9Q3L7 95 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Slc25a17O70579 307 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 P01812 117 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Bri3P28662 125 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Rnase9P60154 184 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Rab3cP62823 227 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Actrt3Q8BXF8 369 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ndufs8Q8K3J1 212 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 RhovQ8VDU1 236 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Olfr135Q8VEY4 312 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gorasp2Q99JX3 451 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Slc31a2Q9CPU9 143 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Mcrip2Q9CQB2 160 aaKnown RBP9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 SdhdQ9CXV1 159 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Wdr4Q9EP82 413 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Dazap1Q9JII5 406 aaKnown RBP9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Klk4Q9Z0M1 255 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 ApomQ9Z1R3 190 aa9.41□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ighv5-2A0A0A6YVX8 117 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm37388A0A0A6YY46 143 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Gm10666K7N6B8 321 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Sult2a5K7N6K9 285 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Vmn1r114L7N226 321 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Vmn1r126L7N2C8 321 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Ifna1P01572 189 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Hoxa1P09022 331 aa9.4□□□□□ -0.9
Ccdc28a-202ENSMUST00000080860 Zfp36l1P23950 338 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 100.6 ms