RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Med12lQ8BQM9 2157 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Trav6n-7A0A075B6A6 116 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ighv5-2A0A0A6YVX8 117 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Esp6A8R0U0 136 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Irf2bp2E9Q1P8 570 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm6594J3QM43 95 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cd74P04441 279 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Zfp27P10077 819 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Zglp1Q1WG82 266 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Wfdc8Q4KUS1 273 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Fxyd3Q61835 88 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mob1bQ8BPB0 216 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Poc1aQ8JZX3 405 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Degs2Q8R2F2 323 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gtf3aQ8VHT7 364 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Scgb3a2Q920H1 91 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Coa3Q9D2R6 108 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Lamp5Q9D387 280 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 DmdP11531 3678 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Abca1P41233 2261 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm14412A2ARR7 526 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm14443A2ARX0 610 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Siglec15A7E1W8 342 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Rdh16O54909 317 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Rpl19P84099 196 aaKnown RBP8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Serf2P84102 59 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Pitpnc1Q8K4R4 332 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Klhdc3Q8VEM9 382 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mrpl51Q9CPY1 128 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Scp2d1Q9DAH1 156 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Myoz1Q9JK37 296 aa8.23□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ctxnd1A0A1B0GST9 59 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Lgals9O08573 353 aaKnown RBP8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Coq2Q66JT7 374 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cysltr2Q920A1 309 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Try5Q9QUK9 246 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Try4Q9R0T7 246 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Chst4Q9R1I1 388 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sptbn1Q62261 2363 aaKnown RBP8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 H2-M5A7VMS3 348 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Eid2bE9Q2Y0 151 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ifna4P07351 186 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Pet117P0DJF2 80 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cr2P19070 1025 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Oas1bQ60856 376 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm10334Q792Y8 246 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1290Q7TQX8 312 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 IqcjQ8BPW0 110 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Prelid1Q8R107 217 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Q8VE95 218 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Aifm1Q9Z0X1 612 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr284A0A0U1RP76 321 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm35060A0A140LIV7 231 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cypt3B1AY64 174 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr467L7N455 308 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 P18528 98 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Pcgf2P23798 342 aaKnown RBP8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Wfdc9Q3UW41 83 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sp9Q64HY3 484 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 SepsecsQ6P6M7 504 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1356Q7TQU8 320 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 9930022D16RikQ8BG27 128 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Srrm4Q8BKA3 608 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 6030452D12RikQ8CD33 222 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Wipi1Q8R3E3 446 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr641Q8VGX6 312 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sh3bgrl3Q91VW3 93 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Tmem70Q921N7 253 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sfxn4Q925N1 313 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ppp1r27Q9D119 154 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mettl9Q9EPL4 318 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 AgrnA2ASQ1 1950 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Pglyrp3A1A547 347 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mef2bO55087 349 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Iglc3P01845 104 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Wnt5aP22725 380 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm10840Q3V2K9 103 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Reep5Q60870 185 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Tmprss3Q8K1T0 453 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 StradbQ8K4T3 418 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cacng8Q8VHW2 423 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 HpxQ91X72 460 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cds2Q99L43 444 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Tbx19Q99ME7 446 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Uqcc1Q9CWU6 295 aa8.22□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm21616B6ZB74 166 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mpig6bD7PDD4 242 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Zfp867E9Q2M4 473 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr609E9Q4X7 319 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 CckarO08786 436 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Bcl6bO88282 474 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Q3UZV7 1028 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hand1Q64279 216 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Vma21Q78T54 101 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1371Q7TQT7 311 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr874Q7TRE6 310 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1271Q8VG62 305 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Fgfrl1Q91V87 529 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Prss28Q924N9 274 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Vmn1r46Q9EQ45 309 aa8.21□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms