RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rasl11bQ922H7 247 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Golt1bQ9CR60 138 aa10.06□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nat8f7E0CYR6 227 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Cd59aO55186 123 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Q0VG49 157 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Q149G0 166 aaKnown RBP10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Foxn4Q8K3Q3 521 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr127Q8VF25 323 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rbmxl1Q91VM5 388 aaKnown RBP10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 RttnQ8R4Y8 2226 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm28171A0A087WQ19 227 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 A0A1L1SR50 188 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Cdk2ap1O35207 114 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Spam1P48794 512 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rpl8P62918 257 aaKnown RBP10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nhlrc3Q8CCH2 347 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Parp11Q8CFF0 331 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr513Q8VFZ3 309 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tlnrd1Q9ERE8 362 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 F8Q06194 2319 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr624F8VQI7 308 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fabp9O08716 132 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ifna4P07351 186 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Igfbp3P47878 292 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Efnb1P52795 345 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm11110Q3U4K9 109 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Q6PIU9 354 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Atpaf1Q811I0 324 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Cdcp2Q8BQH6 427 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 F7P70375 446 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfp729bQ80VN4 1045 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 2900055J20RikQ9D6G3 140 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 IcaQ9DBD0 700 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Prr19B2RW88 366 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rab4aP56371 218 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wfdc6aQ3UW55 136 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tmem167bQ80X45 74 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Anapc10Q8K2H6 185 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Commd5Q8R395 224 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Aifm1Q9Z0X1 612 aa10.05□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Igkv14-126A0A075B5K0 117 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Siglec15A7E1W8 342 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 H2-M5A7VMS3 348 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Slc17a3G3UWD9 498 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 MosP00536 390 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 SellP18337 372 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 RhebQ921J2 184 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 MgamB5THE2 1827 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 MyadmO35682 320 aaKnown RBP10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fam174bQ8K064 153 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Stac2Q8R1B0 408 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 RhovQ8VDU1 236 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr262Q8VFV8 312 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 1700029F12RikQ9CRB4 147 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fbp1Q9QXD6 338 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Dctn5Q9QZB9 182 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Syngr2O55101 224 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rom1P32958 351 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Srd5a2Q99N99 254 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 AmtnQ9D3J8 213 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Lurap1Q9D6I9 239 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 1700067P10RikG3X8U2 183 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Igh-VJ558P01758 117 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Znf691Q3TDE8 283 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Necap1Q9CR95 275 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gpa33Q9JKA5 319 aa10.04□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm4565A0A140LJ87 301 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 A0A286YCQ8 80 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm6176J3QK59 301 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 P01723 117 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm4567Q3UTA8 301 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Hs3st6Q5GFD5 342 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rtn4rQ99PI8 473 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ssbp3Q9D032 388 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Suv39h2Q9EQQ0 477 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fbxw4Q9JMJ2 410 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Iglv3A0A0B4J1K5 122 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Olfr284A0A0U1RP76 321 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm15140A2BEE3 237 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wdr86D3Z757 380 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 FmodP50608 376 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Cd84Q18PI6 329 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Fa2hQ5MPP0 372 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tmem204Q7TQI0 226 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Spink6Q8BT20 105 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nabp2Q8R2Y9 212 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Sfxn4Q925N1 313 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tbx21Q9JKD8 530 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm45800A0A1B0GT24 152 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm3045A0A1D5RMA1 209 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm14288E9Q9W0 88 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Rnase2bO35292 155 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Slc25a17O70579 307 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 P01655 112 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Ctdsp1P58466 261 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Trav18A0A075B656 109 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Igkv13-85A0A075B666 115 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Zfp109A0A0U1RPC5 652 aa10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tpt1P63028 172 aaKnown RBP10.03□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Wdr82Q8BFQ4 313 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms