RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 TGS1Q12052 315 aa6.13□□□□□ -1.43
snR78snR78 CAP1P28495 268 aaKnown RBP6.12□□□□□ -1.43
snR78snR78 MF(ALPHA)2P32435 120 aa6.12□□□□□ -1.43
snR78snR78 GPP1P41277 250 aaKnown RBP6.12□□□□□ -1.43
snR78snR78 FAP7Q12055 197 aaPredicted RBP6.12□□□□□ -1.43
snR78snR78 MRPL9P31334 269 aa6.11□□□□□ -1.43
snR78snR78 GPG1P53130 126 aa6.11□□□□□ -1.43
snR78snR78 IRC3Q06683 689 aa6.11□□□□□ -1.43
snR78snR78 RGT2Q12300 763 aa6.11□□□□□ -1.43
snR78snR78 HOP1P20050 605 aa6.1□□□□□ -1.43
snR78snR78 MTC7P32633 139 aa6.1□□□□□ -1.43
snR78snR78 RPC34P32910 317 aa6.1□□□□□ -1.43
snR78snR78 LOT5P34234 306 aa6.1□□□□□ -1.43
snR78snR78 ULP2P40537 1034 aaPredicted RBP6.1□□□□□ -1.43
snR78snR78 YGR237CP50089 785 aa6.1□□□□□ -1.43
snR78snR78 ATP23P53722 227 aa6.1□□□□□ -1.43
snR78snR78 GFD1Q04839 188 aaKnown RBP6.1□□□□□ -1.43
snR78snR78 ARR3Q06598 404 aa6.1□□□□□ -1.43
snR78snR78 HMG2P12684 1045 aa6.09□□□□□ -1.43
snR78snR78 LRO1P40345 661 aa6.09□□□□□ -1.43
snR78snR78 YMR084WA2P2R3 262 aa6.08□□□□□ -1.44
snR78snR78 FPR3P38911 411 aaKnown RBP6.08□□□□□ -1.44
snR78snR78 YJL043WP47053 257 aa6.08□□□□□ -1.44
snR78snR78 YDL183CP48569 320 aa6.08□□□□□ -1.44
snR78snR78 SQS1P53866 767 aaKnown RBP6.08□□□□□ -1.44
snR78snR78 RPS15Q01855 142 aaKnown RBP6.08□□□□□ -1.44
snR78snR78 TUF1P02992 437 aaKnown RBP6.07□□□□□ -1.44
snR78snR78 AQY1P0CD91 305 aa6.07□□□□□ -1.44
snR78snR78 CCL1P37366 393 aa6.07□□□□□ -1.44
snR78snR78 PSA1P41940 361 aaKnown RBP6.07□□□□□ -1.44
snR78snR78 RNR4P49723 345 aaKnown RBP6.07□□□□□ -1.44
snR78snR78 STP1Q00947 519 aa6.07□□□□□ -1.44
snR78snR78 RNR3P21672 869 aaKnown RBP6.06□□□□□ -1.44
snR78snR78 BEM3P32873 1128 aa6.06□□□□□ -1.44
snR78snR78 BRN1P38170 754 aa6.06□□□□□ -1.44
snR78snR78 YJL193WP39542 402 aa6.06□□□□□ -1.44
snR78snR78 VPS33P20795 691 aa6.05□□□□□ -1.44
snR78snR78 RMA1P36001 430 aaKnown RBP6.05□□□□□ -1.44
snR78snR78 APD1P38281 316 aa6.05□□□□□ -1.44
snR78snR78 EXO1P39875 702 aa6.05□□□□□ -1.44
snR78snR78 YFL015CP43578 164 aa6.05□□□□□ -1.44
snR78snR78 SAP4P53036 818 aa6.05□□□□□ -1.44
snR78snR78 NGL1Q08213 363 aaKnown RBP6.05□□□□□ -1.44
snR78snR78 FRE7Q12333 620 aa6.05□□□□□ -1.44
snR78snR78 NOP56Q12460 504 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
snR78snR78 HXT4P32467 576 aa6.04□□□□□ -1.44
snR78snR78 SEC3P33332 1336 aaKnown RBP6.03□□□□□ -1.44
snR78snR78 MPS1P54199 764 aa6.03□□□□□ -1.44
snR78snR78 USA1Q03714 838 aa6.03□□□□□ -1.44
snR78snR78 YPT10P38146 199 aa6.02□□□□□ -1.45
snR78snR78 NMD5P46970 1048 aa6.02□□□□□ -1.45
snR78snR78 WAR1Q03631 944 aa6.02□□□□□ -1.45
snR78snR78 PCK1P10963 549 aa6.01□□□□□ -1.45
snR78snR78 SEC12P11655 471 aa6.01□□□□□ -1.45
snR78snR78 ATP12P22135 325 aa6.01□□□□□ -1.45
snR78snR78 AEP2P22136 580 aa6.01□□□□□ -1.45
snR78snR78 DAL3P32459 195 aa6.01□□□□□ -1.45
snR78snR78 OPT1P40897 799 aa6.01□□□□□ -1.45
snR78snR78 PEF1P53238 335 aa6.01□□□□□ -1.45
snR78snR78 YPR027CQ12079 277 aa6.01□□□□□ -1.45
snR78snR78 SER1P33330 395 aaKnown RBP6□□□□□ -1.45
snR78snR78 PEA2P40091 420 aa6□□□□□ -1.45
snR78snR78 ERG13P54839 491 aaKnown RBP6□□□□□ -1.45
snR78snR78 SKY1Q03656 742 aa6□□□□□ -1.45
snR78snR78 RMP1Q12530 201 aa6□□□□□ -1.45
snR78snR78 BET2P20133 325 aa5.99□□□□□ -1.45
snR78snR78 SRP68P38687 599 aaKnown RBP5.99□□□□□ -1.45
snR78snR78 SNO3P43544 222 aa5.99□□□□□ -1.45
snR78snR78 PRS5Q12265 496 aaKnown RBP5.99□□□□□ -1.45
snR78snR78 YEL076C-AP0CX16 216 aa5.98□□□□□ -1.45
snR78snR78 YLR464WP0CX17 216 aa5.98□□□□□ -1.45
snR78snR78 YPK1P12688 680 aaKnown RBP5.98□□□□□ -1.45
snR78snR78 DSS4P32601 143 aa5.98□□□□□ -1.45
snR78snR78 YEL076CP39971 216 aa5.98□□□□□ -1.45
snR78snR78 DUG1P43616 481 aaKnown RBP5.98□□□□□ -1.45
snR78snR78 MDR1P53258 950 aa5.98□□□□□ -1.45
snR78snR78 AAC1P04710 309 aa5.97□□□□□ -1.45
snR78snR78 URE2P23202 354 aaKnown RBP5.97□□□□□ -1.45
snR78snR78 TSR4P25040 408 aa5.97□□□□□ -1.45
snR78snR78 GSY2P27472 705 aa5.97□□□□□ -1.45
snR78snR78 GPP2P40106 250 aaKnown RBP5.97□□□□□ -1.45
snR78snR78 BST1P43571 1029 aa5.97□□□□□ -1.45
snR78snR78 BPL1P48445 690 aaPredicted RBP5.97□□□□□ -1.45
snR78snR78 BSP1Q06604 576 aa5.97□□□□□ -1.45
snR78snR78 GEP3Q08622 556 aa5.97□□□□□ -1.45
snR78snR78 RDL1Q12305 139 aaKnown RBP5.97□□□□□ -1.45
snR78snR78 TDA10P42938 290 aa5.96□□□□□ -1.46
snR78snR78 RSC9Q03124 581 aa5.96□□□□□ -1.46
snR78snR78 MRN1Q08925 612 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
snR78snR78 CWH43P25618 953 aa5.95□□□□□ -1.46
snR78snR78 PCL8Q08966 492 aa5.95□□□□□ -1.46
snR78snR78 VPS5Q92331 675 aa5.95□□□□□ -1.46
snR78snR78 ECM32P32644 1121 aaKnown RBP5.94□□□□□ -1.46
snR78snR78 IRC5P43610 853 aa5.94□□□□□ -1.46
snR78snR78 IDP3P53982 420 aaKnown RBP5.94□□□□□ -1.46
snR78snR78 YOR378WQ08902 515 aa5.94□□□□□ -1.46
snR78snR78 AHA1Q12449 350 aaKnown RBP5.94□□□□□ -1.46
snR78snR78 EUG1P32474 517 aa5.93□□□□□ -1.46
snR78snR78 YIL092WP40497 633 aa5.93□□□□□ -1.46
snR78snR78 SCS3P53012 380 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 273.2 ms