RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	RDH54	P38086	958 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	YMC2	P38087	329 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
NUD1	YOR373W	SAH1	P39954	449 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	YER130C	P39959	443 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	CNN1	P43618	361 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	YJR115W	P47152	169 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	UPF3	P48412	387 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	HOT1	Q03213	719 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	ARV1	Q06541	321 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	CSR1	Q06705	408 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	RRD2	Q12461	358 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	RPS3	P05750	240 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	CHS2	P14180	963 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	TRM1	P15565	570 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	RPB10	P22139	70 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	PRR1	P28708	518 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	MGS1	P40151	587 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	JEM1	P40358	645 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	HIS6	P40545	261 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	HXT8	P40886	569 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	SEC26	P41810	973 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	CCT8	P47079	568 aa	Known RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	SPP382	Q06411	708 aa	Predicted RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	IWR1	Q07532	353 aa	Predicted RBP	5.84	□□□□□ -1.47
NUD1	YOR373W	MLH2	Q07980	695 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	CIR2	Q08822	631 aa		5.84	□□□□□ -1.47
NUD1	YOR373W	TAO3	P40468	2376 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	SNF1	P06782	633 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	MSS18	P08593	268 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	APE1	P14904	514 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	IMG2	P25642	146 aa	Predicted RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	PET309	P32522	965 aa	Predicted RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	ADE17	P38009	592 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	MRPS18	P42847	217 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	ART5	P53244	586 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	PPM1	Q04081	328 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	HCR1	Q05775	265 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	ADY3	Q07732	790 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	TOM1	Q03280	3268 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	CDC42	P19073	191 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	GSY2	P27472	705 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	DAL1	P32375	460 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	SAC6	P32599	642 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	ARC19	P33204	171 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	GDH3	P39708	457 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	YJR054W	P47114	497 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	ATH1	P48016	1211 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	YAP1802	P53309	568 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	ESBP6	P53918	673 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	HFD1	Q04458	532 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	GFD1	Q04839	188 aa	Known RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	YLR297W	Q05899	129 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	YPR097W	Q06839	1073 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	YAP7	Q08182	245 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	LEA1	Q08963	238 aa	Predicted RBP	5.83	□□□□□ -1.48
NUD1	YOR373W	YPR027C	Q12079	277 aa		5.83	□□□□□ -1.48
NUD1	YOR373W	ILS1	P09436	1072 aa	Known RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	RPL4A	P10664	362 aa	Known RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	SEC2	P17065	759 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	HNM1	P19807	563 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	SAN1	P22470	610 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	TFB1	P32776	642 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	BEM3	P32873	1128 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	PTC4	P38089	393 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	RRM3	P38766	723 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	GEM1	P39722	662 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	ERR3	P42222	437 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	RPL4B	P49626	362 aa	Known RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	ALT1	P52893	592 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	ERP6	P53198	216 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	RSC4	Q02206	625 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	MTQ2	Q03920	221 aa	Predicted RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	TDA9	Q04545	1251 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	ERV41	Q04651	352 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	RUD3	Q12234	484 aa	Known RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	SOH1	P38633	127 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	DSE1	P40077	573 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	IML2	P47031	731 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	ARA2	Q04212	335 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	CIA1	Q05583	330 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	YLR287C	Q05881	355 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	DBP9	Q06218	594 aa	Known RBP	5.82	□□□□□ -1.48
NUD1	YOR373W	EAF1	Q06337	982 aa		5.82	□□□□□ -1.48
NUD1	YOR373W	MTF1	P14908	341 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	BAS1	P22035	811 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	KIP1	P28742	1111 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	TKL2	P33315	681 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	YBR197C	P38306	217 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	RVS167	P39743	482 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	TPA1	P40032	644 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	SLG1	P54867	378 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	STE20	Q03497	939 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	SNU56	Q03782	492 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	YPR084W	Q06821	456 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	SPO21	Q12411	609 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	CMR1	Q12510	522 aa	Known RBP	5.81	□□□□□ -1.48
NUD1	YOR373W	MDM12	Q92328	271 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	AI5_BETA	Q9ZZX0	354 aa		5.81	□□□□□ -1.48
NUD1	YOR373W	GAL10	P04397	699 aa		5.81	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms