RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W DBF4P32325 704 aa6.92□□□□□ -1.3
LSC1YOR142W PSE1P32337 1089 aaKnown RBP6.92□□□□□ -1.3
LSC1YOR142W ECM32P32644 1121 aaKnown RBP6.92□□□□□ -1.3
LSC1YOR142W BLI1P35727 113 aa6.92□□□□□ -1.3
LSC1YOR142W URA8P38627 578 aaPredicted RBP6.92□□□□□ -1.3
LSC1YOR142W KHA1P40309 873 aa6.92□□□□□ -1.3
LSC1YOR142W LSB3P43603 459 aaKnown RBP6.92□□□□□ -1.3
LSC1YOR142W RTT101P47050 842 aa6.92□□□□□ -1.3
LSC1YOR142W RKM2Q03942 479 aa6.92□□□□□ -1.3
LSC1YOR142W ERV41Q04651 352 aa6.92□□□□□ -1.3
LSC1YOR142W RTN1Q04947 295 aaKnown RBP6.92□□□□□ -1.3
LSC1YOR142W YCG1Q06680 1035 aa6.92□□□□□ -1.3
LSC1YOR142W AAD4Q07747 329 aa6.92□□□□□ -1.3
LSC1YOR142W GPI10P30777 616 aa6.91□□□□□ -1.3
LSC1YOR142W SGE1P33335 543 aa6.91□□□□□ -1.3
LSC1YOR142W EAP1P36041 632 aaKnown RBP6.91□□□□□ -1.3
LSC1YOR142W RRT2P38332 387 aa6.91□□□□□ -1.3
LSC1YOR142W HXT5P38695 592 aa6.91□□□□□ -1.3
LSC1YOR142W TCD1P38756 429 aa6.91□□□□□ -1.3
LSC1YOR142W FSH1P38777 243 aaKnown RBP6.91□□□□□ -1.3
LSC1YOR142W HEM14P40012 539 aa6.91□□□□□ -1.3
LSC1YOR142W KTR7P40504 517 aa6.91□□□□□ -1.3
LSC1YOR142W YIR007WP40566 764 aa6.91□□□□□ -1.3
LSC1YOR142W CNN1P43618 361 aa6.91□□□□□ -1.3
LSC1YOR142W SNG1P46950 547 aa6.91□□□□□ -1.3
LSC1YOR142W YJR079WP47126 109 aa6.91□□□□□ -1.3
LSC1YOR142W VEL1P53058 206 aa6.91□□□□□ -1.3
LSC1YOR142W PEX31P53203 462 aa6.91□□□□□ -1.3
LSC1YOR142W NOG2P53742 486 aaKnown RBP6.91□□□□□ -1.3
LSC1YOR142W ALF1P53904 254 aa6.91□□□□□ -1.3
LSC1YOR142W CTR9P89105 1077 aa6.91□□□□□ -1.3
LSC1YOR142W CDC55Q00362 526 aa6.91□□□□□ -1.3
LSC1YOR142W ATG16Q03818 150 aa6.91□□□□□ -1.3
LSC1YOR142W IVY1Q04934 453 aa6.91□□□□□ -1.3
LSC1YOR142W NDD1Q08887 554 aa6.91□□□□□ -1.3
LSC1YOR142W FLC1Q08967 793 aa6.91□□□□□ -1.3
LSC1YOR142W THI21Q08975 551 aa6.91□□□□□ -1.3
LSC1YOR142W MEX67Q99257 599 aaKnown RBP6.91□□□□□ -1.3
LSC1YOR142W MPD2Q99316 277 aa6.91□□□□□ -1.3
LSC1YOR142W IRA2P19158 3079 aa6.91□□□□□ -1.3
LSC1YOR142W FMP27Q06179 2628 aa6.91□□□□□ -1.3
LSC1YOR142W YPK1P12688 680 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W CYC8P14922 966 aa6.9□□□□□ -1.3
LSC1YOR142W HXT3P32466 567 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W AIM26P32858 118 aa6.9□□□□□ -1.3
LSC1YOR142W STO1P34160 861 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W KTR4P38131 464 aa6.9□□□□□ -1.3
LSC1YOR142W EDC3P39998 551 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W SAP185P40856 1058 aa6.9□□□□□ -1.3
LSC1YOR142W FAA4P47912 694 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W KAP114P53067 1004 aa6.9□□□□□ -1.3
LSC1YOR142W TAN1P53072 289 aaPredicted RBP6.9□□□□□ -1.3
LSC1YOR142W JJJ1P53863 590 aa6.9□□□□□ -1.3
LSC1YOR142W IMP4P53941 290 aaKnown RBP6.9□□□□□ -1.3
LSC1YOR142W YNL040WP53960 456 aaPredicted RBP6.9□□□□□ -1.3
LSC1YOR142W YMR206WQ03695 313 aa6.9□□□□□ -1.3
LSC1YOR142W UFO1Q04511 668 aa6.9□□□□□ -1.3
LSC1YOR142W RAD10P06838 210 aa6.89□□□□□ -1.31
LSC1YOR142W ARF2P19146 181 aaKnown RBP6.89□□□□□ -1.31
LSC1YOR142W SPC110P32380 944 aa6.89□□□□□ -1.31
LSC1YOR142W SEC6P32844 805 aa6.89□□□□□ -1.31
LSC1YOR142W EBP2P36049 427 aaKnown RBP6.89□□□□□ -1.31
LSC1YOR142W MCX1P38323 520 aaPredicted RBP6.89□□□□□ -1.31
LSC1YOR142W GGA2P38817 585 aaKnown RBP6.89□□□□□ -1.31
LSC1YOR142W LAM1P38851 1228 aa6.89□□□□□ -1.31
LSC1YOR142W PRM9P39551 298 aa6.89□□□□□ -1.31
LSC1YOR142W ERP2P39704 215 aa6.89□□□□□ -1.31
LSC1YOR142W LCP5P40079 357 aaPredicted RBP6.89□□□□□ -1.31
LSC1YOR142W UBP7P40453 1071 aa6.89□□□□□ -1.31
LSC1YOR142W BST1P43571 1029 aa6.89□□□□□ -1.31
LSC1YOR142W RRT5P43607 289 aa6.89□□□□□ -1.31
LSC1YOR142W PRP24P49960 444 aaKnown RBP6.89□□□□□ -1.31
LSC1YOR142W NMA2P53204 395 aa6.89□□□□□ -1.31
LSC1YOR142W BTN2P53286 410 aa6.89□□□□□ -1.31
LSC1YOR142W YNR065CP53751 1116 aa6.89□□□□□ -1.31
LSC1YOR142W YNL108CP53929 270 aa6.89□□□□□ -1.31
LSC1YOR142W SND1Q04007 877 aa6.89□□□□□ -1.31
LSC1YOR142W KAP95Q06142 861 aaKnown RBP6.89□□□□□ -1.31
LSC1YOR142W YCS4Q06156 1176 aa6.89□□□□□ -1.31
LSC1YOR142W YPR084WQ06821 456 aa6.89□□□□□ -1.31
LSC1YOR142W CIR2Q08822 631 aa6.89□□□□□ -1.31
LSC1YOR142W IZH4Q99393 312 aa6.89□□□□□ -1.31
LSC1YOR142W CET1O13297 549 aaPredicted RBP6.88□□□□□ -1.31
LSC1YOR142W GFA1P14742 717 aaKnown RBP6.88□□□□□ -1.31
LSC1YOR142W HCM1P25364 564 aa6.88□□□□□ -1.31
LSC1YOR142W YCR015CP25616 317 aa6.88□□□□□ -1.31
LSC1YOR142W MFT1P33441 392 aaKnown RBP6.88□□□□□ -1.31
LSC1YOR142W YBL055CP34220 418 aaPredicted RBP6.88□□□□□ -1.31
LSC1YOR142W SPT23P35210 1082 aa6.88□□□□□ -1.31
LSC1YOR142W RCK2P38623 610 aa6.88□□□□□ -1.31
LSC1YOR142W PMC1P38929 1173 aaPredicted RBP6.88□□□□□ -1.31
LSC1YOR142W SAK1P38990 1142 aa6.88□□□□□ -1.31
LSC1YOR142W DUN1P39009 513 aa6.88□□□□□ -1.31
LSC1YOR142W SPC72P39723 622 aa6.88□□□□□ -1.31
LSC1YOR142W EMW1P42842 904 aaKnown RBP6.88□□□□□ -1.31
LSC1YOR142W MRX6P48564 524 aa6.88□□□□□ -1.31
LSC1YOR142W COP1P53622 1201 aaKnown RBP6.88□□□□□ -1.31
LSC1YOR142W CWC24P53769 259 aa6.88□□□□□ -1.31
LSC1YOR142W NGL3Q03210 505 aa6.88□□□□□ -1.31
LSC1YOR142W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms