RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C ENP2P48234 707 aaKnown RBP3.27□□□□□ -1.89
PRE8YML092C BUL1P48524 976 aa3.27□□□□□ -1.89
PRE8YML092C FMS1P50264 508 aa3.27□□□□□ -1.89
PRE8YML092C DAM1P53267 343 aa3.27□□□□□ -1.89
PRE8YML092C RPT6Q01939 405 aaKnown RBP3.27□□□□□ -1.89
PRE8YML092C SLU7Q02775 382 aaKnown RBP3.27□□□□□ -1.89
PRE8YML092C LRS4Q04087 347 aaKnown RBP3.27□□□□□ -1.89
PRE8YML092C YDR514CQ04408 483 aa3.27□□□□□ -1.89
PRE8YML092C RSC3Q06639 885 aa3.27□□□□□ -1.89
PRE8YML092C CDC45Q08032 650 aa3.27□□□□□ -1.89
PRE8YML092C ALG7P07286 448 aa3.26□□□□□ -1.89
PRE8YML092C OPI1P21957 404 aa3.26□□□□□ -1.89
PRE8YML092C MBR1P23493 339 aa3.26□□□□□ -1.89
PRE8YML092C YCL002CP25565 263 aa3.26□□□□□ -1.89
PRE8YML092C NGG1P32494 702 aa3.26□□□□□ -1.89
PRE8YML092C CTF13P35203 478 aa3.26□□□□□ -1.89
PRE8YML092C EMC3P36039 253 aa3.26□□□□□ -1.89
PRE8YML092C BET3P36149 193 aa3.26□□□□□ -1.89
PRE8YML092C MOH1P38191 138 aa3.26□□□□□ -1.89
PRE8YML092C RFS1P38234 210 aaKnown RBP3.26□□□□□ -1.89
PRE8YML092C RRP8P38961 392 aaKnown RBP3.26□□□□□ -1.89
PRE8YML092C SSY5P47002 699 aa3.26□□□□□ -1.89
PRE8YML092C NNF1P47149 201 aa3.26□□□□□ -1.89
PRE8YML092C TIM44Q01852 431 aa3.26□□□□□ -1.89
PRE8YML092C SKY1Q03656 742 aa3.26□□□□□ -1.89
PRE8YML092C GIS1Q03833 894 aa3.26□□□□□ -1.89
PRE8YML092C DLT1Q04216 342 aa3.26□□□□□ -1.89
PRE8YML092C MYO5Q04439 1219 aaKnown RBP3.26□□□□□ -1.89
PRE8YML092C CRR1Q05790 422 aa3.26□□□□□ -1.89
PRE8YML092C MMR1Q06324 491 aa3.26□□□□□ -1.89
PRE8YML092C REH1Q06709 432 aa3.26□□□□□ -1.89
PRE8YML092C IRC10Q08118 586 aa3.26□□□□□ -1.89
PRE8YML092C MCH5Q08777 521 aa3.26□□□□□ -1.89
PRE8YML092C TRM13Q12383 476 aa3.26□□□□□ -1.89
PRE8YML092C TEL1P38110 2787 aa3.26□□□□□ -1.89
PRE8YML092C PPR1P07272 904 aaPredicted RBP3.25□□□□□ -1.89
PRE8YML092C TUB3P09734 445 aaKnown RBP3.25□□□□□ -1.89
PRE8YML092C OAR1P35731 278 aa3.25□□□□□ -1.89
PRE8YML092C OSH3P38713 996 aaKnown RBP3.25□□□□□ -1.89
PRE8YML092C NMD2P38798 1089 aaKnown RBP3.25□□□□□ -1.89
PRE8YML092C SET5P38890 526 aaKnown RBP3.25□□□□□ -1.89
PRE8YML092C ELO3P40319 345 aa3.25□□□□□ -1.89
PRE8YML092C CSM2P40465 213 aa3.25□□□□□ -1.89
PRE8YML092C RTA1P53047 317 aa3.25□□□□□ -1.89
PRE8YML092C LSB1P53281 241 aa3.25□□□□□ -1.89
PRE8YML092C YGR283CP53336 341 aaPredicted RBP3.25□□□□□ -1.89
PRE8YML092C MUK1Q02866 612 aa3.25□□□□□ -1.89
PRE8YML092C YLR455WQ06188 304 aa3.25□□□□□ -1.89
PRE8YML092C SGO1Q08490 590 aa3.25□□□□□ -1.89
PRE8YML092C FRE5Q08908 694 aa3.25□□□□□ -1.89
PRE8YML092C STI1P15705 589 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PRE8YML092C MAK31P23059 88 aa3.24□□□□□ -1.89
PRE8YML092C MSS51P32335 436 aa3.24□□□□□ -1.89
PRE8YML092C YKL097CP34245 136 aa3.24□□□□□ -1.89
PRE8YML092C DRE2P36152 348 aa3.24□□□□□ -1.89
PRE8YML092C TVP38P36164 337 aa3.24□□□□□ -1.89
PRE8YML092C YFL052WP43551 465 aa3.24□□□□□ -1.89
PRE8YML092C ASI2P53895 289 aa3.24□□□□□ -1.89
PRE8YML092C MDM1Q01846 1127 aa3.24□□□□□ -1.89
PRE8YML092C ECM16Q04217 1267 aaKnown RBP3.24□□□□□ -1.89
PRE8YML092C OMS1Q06668 471 aa3.24□□□□□ -1.89
PRE8YML092C BRE1Q07457 700 aaKnown RBP3.24□□□□□ -1.89
PRE8YML092C DSE3Q08729 430 aa3.24□□□□□ -1.89
PRE8YML092C ACF2Q12168 779 aa3.24□□□□□ -1.89
PRE8YML092C ARP6Q12509 438 aa3.24□□□□□ -1.89
PRE8YML092C DIF1O13577 133 aa3.23□□□□□ -1.89
PRE8YML092C PRP4P20053 465 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C BET2P20133 325 aa3.23□□□□□ -1.89
PRE8YML092C UBC1P21734 215 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C IMG2P25642 146 aaPredicted RBP3.23□□□□□ -1.89
PRE8YML092C ADK2P26364 225 aa3.23□□□□□ -1.89
PRE8YML092C RME1P32338 300 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C YKL091CP33324 310 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C UBP11P36026 717 aa3.23□□□□□ -1.89
PRE8YML092C APN2P38207 520 aa3.23□□□□□ -1.89
PRE8YML092C ARP1P38696 384 aa3.23□□□□□ -1.89
PRE8YML092C BUD16P39988 312 aa3.23□□□□□ -1.89
PRE8YML092C HMF1P40037 129 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C MTR3P48240 250 aaPredicted RBP3.23□□□□□ -1.89
PRE8YML092C STB4P50104 949 aa3.23□□□□□ -1.89
PRE8YML092C ASE1P50275 885 aa3.23□□□□□ -1.89
PRE8YML092C MUP1P50276 574 aa3.23□□□□□ -1.89
PRE8YML092C YRB30P53107 440 aaPredicted RBP3.23□□□□□ -1.89
PRE8YML092C NRG1Q03125 231 aa3.23□□□□□ -1.89
PRE8YML092C PIG1Q06216 648 aa3.23□□□□□ -1.89
PRE8YML092C VIP1Q06685 1146 aaKnown RBP3.23□□□□□ -1.89
PRE8YML092C CLF1Q12309 687 aaPredicted RBP3.23□□□□□ -1.89
PRE8YML092C YOL098CQ12496 1037 aa3.23□□□□□ -1.89
PRE8YML092C CDC16P09798 840 aa3.22□□□□□ -1.89
PRE8YML092C RPL40AP0CH08 128 aaKnown RBP3.22□□□□□ -1.89
PRE8YML092C RPL40BP0CH09 128 aaKnown RBP3.22□□□□□ -1.89
PRE8YML092C RPL8AP17076 256 aaKnown RBP3.22□□□□□ -1.89
PRE8YML092C SPC29P33419 253 aa3.22□□□□□ -1.89
PRE8YML092C PPS1P38148 807 aa3.22□□□□□ -1.89
PRE8YML092C CRG1P38892 291 aaRIP-Chip data3.22□□□□□ -1.89not detected
PRE8YML092C YEL025CP39991 1188 aa3.22□□□□□ -1.89
PRE8YML092C YIR016WP40572 265 aa3.22□□□□□ -1.89
PRE8YML092C RLP7P40693 322 aaKnown RBP3.22□□□□□ -1.89
PRE8YML092C PFA3P42836 336 aa3.22□□□□□ -1.89
PRE8YML092C ALY2P47029 1046 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms