RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C GUF1P46943 645 aa9.48□□□□□ -0.89
SEC61YLR378C MNN11P46985 422 aaKnown RBP9.48□□□□□ -0.89
SEC61YLR378C RSM26P47141 266 aa9.48□□□□□ -0.89
SEC61YLR378C NUT1P53114 1132 aa9.48□□□□□ -0.89
SEC61YLR378C KTR5P53966 522 aaPredicted RBP9.48□□□□□ -0.89
SEC61YLR378C BET4Q00618 327 aa9.48□□□□□ -0.89
SEC61YLR378C YPL062WQ02781 134 aa9.48□□□□□ -0.89
SEC61YLR378C YML083CQ04526 418 aa9.48□□□□□ -0.89
SEC61YLR378C PIG1Q06216 648 aa9.48□□□□□ -0.89
SEC61YLR378C VHS3Q08438 674 aa9.48□□□□□ -0.89
SEC61YLR378C AVL9Q12500 764 aa9.48□□□□□ -0.89
SEC61YLR378C ATP1P07251 545 aaKnown RBP9.48□□□□□ -0.89
SEC61YLR378C RGR1P19263 1082 aa9.48□□□□□ -0.89
SEC61YLR378C OXP1P28273 1286 aa9.48□□□□□ -0.89
SEC61YLR378C NMD3P38861 518 aaKnown RBP9.48□□□□□ -0.89
SEC61YLR378C PRM9P39551 298 aa9.48□□□□□ -0.89
SEC61YLR378C MND2P40577 368 aa9.48□□□□□ -0.89
SEC61YLR378C OPT1P40897 799 aa9.48□□□□□ -0.89
SEC61YLR378C SAE2P46946 345 aa9.48□□□□□ -0.89
SEC61YLR378C VPS9P54787 451 aa9.48□□□□□ -0.89
SEC61YLR378C MRN1Q08925 612 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
SEC61YLR378C HRT3Q12347 344 aa9.48□□□□□ -0.89
SEC61YLR378C PAB1P04147 577 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
SEC61YLR378C URA7P28274 579 aaKnown RBP9.47□□□□□ -0.89
SEC61YLR378C DEP1P31385 405 aa9.47□□□□□ -0.89
SEC61YLR378C PEX2P32800 271 aa9.47□□□□□ -0.89
SEC61YLR378C RAD5P32849 1169 aaPredicted RBP9.47□□□□□ -0.89
SEC61YLR378C YBR284WP38150 797 aa9.47□□□□□ -0.89
SEC61YLR378C GDT1P38301 280 aaPredicted RBP9.47□□□□□ -0.89
SEC61YLR378C AIM18P38884 321 aa9.47□□□□□ -0.89
SEC61YLR378C PRK1P40494 810 aa9.47□□□□□ -0.89
SEC61YLR378C KTR6P54070 446 aa9.47□□□□□ -0.89
SEC61YLR378C ADA2Q02336 434 aa9.47□□□□□ -0.89
SEC61YLR378C ARP7Q12406 477 aa9.47□□□□□ -0.89
SEC61YLR378C ILV2P07342 687 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C IMA3P0CW40 589 aa9.46□□□□□ -0.9
SEC61YLR378C IMA4P0CW41 589 aa9.46□□□□□ -0.9
SEC61YLR378C YCR051WP25631 222 aa9.46□□□□□ -0.9
SEC61YLR378C HXT3P32466 567 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C WHI3P34761 661 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C KES1P35844 434 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C BIT2P38346 545 aa9.46□□□□□ -0.9
SEC61YLR378C FIR1P40020 876 aa9.46□□□□□ -0.9
SEC61YLR378C ALA1P40825 983 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C RRT5P43607 289 aa9.46□□□□□ -0.9
SEC61YLR378C VPS25P47142 202 aa9.46□□□□□ -0.9
SEC61YLR378C MTD1Q02046 320 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C INA17Q02888 182 aa9.46□□□□□ -0.9
SEC61YLR378C HRD3Q05787 833 aa9.46□□□□□ -0.9
SEC61YLR378C MRI1Q06489 411 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C IMA2Q08295 589 aa9.46□□□□□ -0.9
SEC61YLR378C MPC54Q08550 464 aa9.46□□□□□ -0.9
SEC61YLR378C LEA1Q08963 238 aaPredicted RBP9.46□□□□□ -0.9
SEC61YLR378C NCA2Q12374 616 aa9.46□□□□□ -0.9
SEC61YLR378C EFG1Q3E705 233 aaKnown RBP9.46□□□□□ -0.9
SEC61YLR378C ILS1P09436 1072 aaKnown RBP9.45□□□□□ -0.9
SEC61YLR378C SRV2P17555 526 aaKnown RBP9.45□□□□□ -0.9
SEC61YLR378C KIP2P28743 706 aa9.45□□□□□ -0.9
SEC61YLR378C SPC97P38863 823 aa9.45□□□□□ -0.9
SEC61YLR378C REV7P38927 245 aa9.45□□□□□ -0.9
SEC61YLR378C STL1P39932 569 aa9.45□□□□□ -0.9
SEC61YLR378C YGR127WP53275 312 aa9.45□□□□□ -0.9
SEC61YLR378C AIM32Q04689 311 aa9.45□□□□□ -0.9
SEC61YLR378C PMT7Q06644 662 aa9.45□□□□□ -0.9
SEC61YLR378C AAD15Q08361 143 aa9.45□□□□□ -0.9
SEC61YLR378C SPE3Q12074 293 aaKnown RBP9.45□□□□□ -0.9
SEC61YLR378C APM4Q99186 491 aa9.45□□□□□ -0.9
SEC61YLR378C AI5_ALPHAQ9ZZX1 630 aa9.45□□□□□ -0.9
SEC61YLR378C CCP1P00431 361 aa9.44□□□□□ -0.9
SEC61YLR378C CAD1P24813 409 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C CDC10P25342 322 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C YIH1P25637 258 aa9.44□□□□□ -0.9
SEC61YLR378C LOS1P33418 1100 aaPredicted RBP9.44□□□□□ -0.9
SEC61YLR378C PEX5P35056 612 aa9.44□□□□□ -0.9
SEC61YLR378C PAM1P37304 830 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C OTU2P38747 307 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C SMF2P38778 549 aa9.44□□□□□ -0.9
SEC61YLR378C FHL1P39521 936 aa9.44□□□□□ -0.9
SEC61YLR378C MMF1P40185 145 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C IML2P47031 731 aa9.44□□□□□ -0.9
SEC61YLR378C COP1P53622 1201 aaKnown RBP9.44□□□□□ -0.9
SEC61YLR378C SPG3Q04398 127 aaPredicted RBP9.44□□□□□ -0.9
SEC61YLR378C FAR8Q05040 523 aa9.44□□□□□ -0.9
SEC61YLR378C NRT1Q08485 598 aa9.44□□□□□ -0.9
SEC61YLR378C GPM3Q12326 303 aa9.44□□□□□ -0.9
SEC61YLR378C MAS1P10507 462 aa9.43□□□□□ -0.9
SEC61YLR378C DSS4P32601 143 aa9.43□□□□□ -0.9
SEC61YLR378C TSA1P34760 196 aaKnown RBP9.43□□□□□ -0.9
SEC61YLR378C YBR056WP38081 501 aa9.43□□□□□ -0.9
SEC61YLR378C FSH1P38777 243 aaKnown RBP9.43□□□□□ -0.9
SEC61YLR378C LAM1P38851 1228 aa9.43□□□□□ -0.9
SEC61YLR378C YJL132WP47014 750 aa9.43□□□□□ -0.9
SEC61YLR378C NMA111P53920 997 aa9.43□□□□□ -0.9
SEC61YLR378C CEG1Q01159 459 aaPredicted RBP9.43□□□□□ -0.9
SEC61YLR378C SPP1Q03012 353 aa9.43□□□□□ -0.9
SEC61YLR378C ADE13Q05911 482 aaKnown RBP9.43□□□□□ -0.9
SEC61YLR378C HOS1Q12214 470 aa9.43□□□□□ -0.9
SEC61YLR378C HSP78P33416 811 aa9.42□□□□□ -0.9
SEC61YLR378C JHD1P40034 492 aa9.42□□□□□ -0.9
SEC61YLR378C YFL052WP43551 465 aa9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms