RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C RFX1P48743 811 aa6.03□□□□□ -1.44
NMD4YLR363C YGR151CP53287 111 aa6.03□□□□□ -1.44
NMD4YLR363C NOP15P53927 220 aaPredicted RBP6.03□□□□□ -1.44
NMD4YLR363C RCR2Q03446 210 aaKnown RBP6.03□□□□□ -1.44
NMD4YLR363C YPS7Q06325 596 aa6.03□□□□□ -1.44
NMD4YLR363C YFT2Q06676 274 aa6.03□□□□□ -1.44
NMD4YLR363C SLM3Q12093 417 aa6.03□□□□□ -1.44
NMD4YLR363C SUT2Q12286 268 aa6.03□□□□□ -1.44
NMD4YLR363C RPS17AP02407 136 aaKnown RBP6.02□□□□□ -1.45
NMD4YLR363C RPS17BP14127 136 aaKnown RBP6.02□□□□□ -1.45
NMD4YLR363C FUB1P25659 250 aa6.02□□□□□ -1.45
NMD4YLR363C NTH1P32356 751 aa6.02□□□□□ -1.45
NMD4YLR363C OAF3P36023 863 aa6.02□□□□□ -1.45
NMD4YLR363C SET3P36124 751 aa6.02□□□□□ -1.45
NMD4YLR363C CTP1P38152 299 aa6.02□□□□□ -1.45
NMD4YLR363C COS111P38308 924 aa6.02□□□□□ -1.45
NMD4YLR363C ENP1P38333 483 aaKnown RBP6.02□□□□□ -1.45
NMD4YLR363C YIL166CP40445 542 aa6.02□□□□□ -1.45
NMD4YLR363C PTA1Q01329 785 aaPredicted RBP6.02□□□□□ -1.45
NMD4YLR363C YHM2Q04013 314 aa6.02□□□□□ -1.45
NMD4YLR363C PPN1Q04119 674 aa6.02□□□□□ -1.45
NMD4YLR363C YDL086WQ07505 273 aa6.02□□□□□ -1.45
NMD4YLR363C HFI1Q12060 488 aa6.02□□□□□ -1.45
NMD4YLR363C TY4B-HP0C2J7 1802 aa6.02□□□□□ -1.45
NMD4YLR363C TY4B-JP47024 1803 aa6.02□□□□□ -1.45
NMD4YLR363C IME1P21190 360 aa6.01□□□□□ -1.45
NMD4YLR363C GMH1P36125 273 aa6.01□□□□□ -1.45
NMD4YLR363C APM4Q99186 491 aa6.01□□□□□ -1.45
NMD4YLR363C DUN1P39009 513 aa6□□□□□ -1.45
NMD4YLR363C KHA1P40309 873 aa6□□□□□ -1.45
NMD4YLR363C BUD8P41698 603 aa6□□□□□ -1.45
NMD4YLR363C YSH1Q06224 779 aaPredicted RBP6□□□□□ -1.45
NMD4YLR363C STP4Q07351 490 aa6□□□□□ -1.45
NMD4YLR363C URB1P34241 1764 aaKnown RBP5.99□□□□□ -1.45
NMD4YLR363C YKL133CP36066 463 aa5.99□□□□□ -1.45
NMD4YLR363C YHR097CP38809 366 aaKnown RBP5.99□□□□□ -1.45
NMD4YLR363C NPR2P39923 615 aa5.99□□□□□ -1.45
NMD4YLR363C SPO1P53541 631 aa5.99□□□□□ -1.45
NMD4YLR363C YLR419WQ06698 1435 aaKnown RBP5.99□□□□□ -1.45
NMD4YLR363C RPN13O13563 156 aa5.98□□□□□ -1.45
NMD4YLR363C RPS24AP0CX31 135 aaKnown RBP5.98□□□□□ -1.45
NMD4YLR363C RPS24BP0CX32 135 aaKnown RBP5.98□□□□□ -1.45
NMD4YLR363C KCC4P25389 1037 aa5.98□□□□□ -1.45
NMD4YLR363C KSP1P38691 1029 aaKnown RBP5.98□□□□□ -1.45
NMD4YLR363C UBP12P39538 1254 aa5.98□□□□□ -1.45
NMD4YLR363C IES1P43579 692 aa5.98□□□□□ -1.45
NMD4YLR363C APM1Q00776 475 aaPredicted RBP5.98□□□□□ -1.45
NMD4YLR363C BMS1Q08965 1183 aaKnown RBP5.98□□□□□ -1.45
NMD4YLR363C RPS21AP0C0V8 87 aaKnown RBP5.97□□□□□ -1.45
NMD4YLR363C ILV6P25605 309 aaKnown RBP5.97□□□□□ -1.45
NMD4YLR363C MSS1P32559 526 aaPredicted RBP5.97□□□□□ -1.45
NMD4YLR363C PPZ2P33329 710 aa5.97□□□□□ -1.45
NMD4YLR363C APL3P38065 1025 aa5.97□□□□□ -1.45
NMD4YLR363C FAT1P38225 669 aa5.97□□□□□ -1.45
NMD4YLR363C LYS4P49367 693 aaPredicted RBP5.97□□□□□ -1.45
NMD4YLR363C TAF4P50105 388 aa5.97□□□□□ -1.45
NMD4YLR363C NSE5Q03718 556 aa5.97□□□□□ -1.45
NMD4YLR363C SPT7P35177 1332 aa5.97□□□□□ -1.45
NMD4YLR363C GLN4P13188 809 aaKnown RBP5.96□□□□□ -1.46
NMD4YLR363C SPO11P23179 398 aa5.96□□□□□ -1.46
NMD4YLR363C EMP70P32802 667 aa5.96□□□□□ -1.46
NMD4YLR363C SPC98P53540 846 aa5.96□□□□□ -1.46
NMD4YLR363C YEL020CP39994 560 aa5.95□□□□□ -1.46
NMD4YLR363C ATF1P40353 525 aa5.95□□□□□ -1.46
NMD4YLR363C ENP2P48234 707 aaKnown RBP5.95□□□□□ -1.46
NMD4YLR363C NMA2P53204 395 aa5.95□□□□□ -1.46
NMD4YLR363C IZH3Q07959 543 aa5.95□□□□□ -1.46
NMD4YLR363C RKI1Q12189 258 aa5.95□□□□□ -1.46
NMD4YLR363C TUB1P09733 447 aaKnown RBP5.94□□□□□ -1.46
NMD4YLR363C ADY2P25613 283 aa5.94□□□□□ -1.46
NMD4YLR363C PRE4P30657 266 aa5.94□□□□□ -1.46
NMD4YLR363C CUE2P36075 443 aaKnown RBP5.94□□□□□ -1.46
NMD4YLR363C VID28P40547 921 aa5.94□□□□□ -1.46
NMD4YLR363C YRF1-4O13559 1382 aa5.93□□□□□ -1.46
NMD4YLR363C SIR4P11978 1358 aa5.93□□□□□ -1.46
NMD4YLR363C ACO1P19414 778 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
NMD4YLR363C MUP3P38734 546 aa5.93□□□□□ -1.46
NMD4YLR363C RIX1P38883 763 aaPredicted RBP5.93□□□□□ -1.46
NMD4YLR363C DUG1P43616 481 aaKnown RBP5.93□□□□□ -1.46
NMD4YLR363C DIP5P53388 608 aa5.93□□□□□ -1.46
NMD4YLR363C FDC1Q03034 503 aa5.93□□□□□ -1.46
NMD4YLR363C UFO1Q04511 668 aa5.93□□□□□ -1.46
NMD4YLR363C LAM4P38800 1345 aa5.93□□□□□ -1.46
NMD4YLR363C CDC26P14724 124 aa5.92□□□□□ -1.46
NMD4YLR363C YPT53P36019 220 aa5.92□□□□□ -1.46
NMD4YLR363C YEN1P40028 759 aa5.92□□□□□ -1.46
NMD4YLR363C RNR4P49723 345 aaKnown RBP5.92□□□□□ -1.46
NMD4YLR363C HLR1Q04429 423 aa5.92□□□□□ -1.46
NMD4YLR363C ARO10Q06408 635 aa5.92□□□□□ -1.46
NMD4YLR363C FKS3Q04952 1785 aa5.92□□□□□ -1.46
NMD4YLR363C YML133CQ03099 1374 aa5.92□□□□□ -1.46
NMD4YLR363C YLL067CQ07888 1374 aa5.92□□□□□ -1.46
NMD4YLR363C YLL066CQ99208 1374 aa5.92□□□□□ -1.46
NMD4YLR363C DGR2P32330 852 aa5.91□□□□□ -1.46
NMD4YLR363C MF(ALPHA)2P32435 120 aa5.91□□□□□ -1.46
NMD4YLR363C ELF1P36053 145 aa5.91□□□□□ -1.46
NMD4YLR363C YMC2P38087 329 aa5.91□□□□□ -1.46
NMD4YLR363C TMN3P40071 706 aa5.91□□□□□ -1.46
NMD4YLR363C NDJ1Q12366 352 aa5.91□□□□□ -1.46
NMD4YLR363C RMP1Q12530 201 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms