RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C BEM4P39011 633 aa1.96□□□□□ -2.1
VPS55YJR044C BUD8P41698 603 aa1.96□□□□□ -2.1
VPS55YJR044C COP1P53622 1201 aaKnown RBP1.96□□□□□ -2.1
VPS55YJR044C RPS15Q01855 142 aaKnown RBP1.96□□□□□ -2.1
VPS55YJR044C YPL071CQ02864 156 aa1.96□□□□□ -2.1
VPS55YJR044C MRPL1Q04599 285 aa1.96□□□□□ -2.1
VPS55YJR044C ENT2Q05785 613 aa1.96□□□□□ -2.1
VPS55YJR044C YLR407WQ06070 228 aa1.96□□□□□ -2.1
VPS55YJR044C TPO3Q06451 622 aa1.96□□□□□ -2.1
VPS55YJR044C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
VPS55YJR044C YGR161W-CQ3E744 92 aa1.96□□□□□ -2.1
VPS55YJR044C YPT1P01123 206 aaKnown RBP1.95□□□□□ -2.1
VPS55YJR044C YEL076C-AP0CX16 216 aa1.95□□□□□ -2.1
VPS55YJR044C YLR464WP0CX17 216 aa1.95□□□□□ -2.1
VPS55YJR044C PHO8P11491 566 aa1.95□□□□□ -2.1
VPS55YJR044C SFL1P20134 766 aa1.95□□□□□ -2.1
VPS55YJR044C CRG1P38892 291 aaRIP-Chip data1.95□□□□□ -2.1not detected
VPS55YJR044C DUN1P39009 513 aa1.95□□□□□ -2.1
VPS55YJR044C YEL076CP39971 216 aa1.95□□□□□ -2.1
VPS55YJR044C SAE2P46946 345 aa1.95□□□□□ -2.1
VPS55YJR044C SUB1P54000 292 aaKnown RBP1.95□□□□□ -2.1
VPS55YJR044C RPL15BP54780 204 aaPredicted RBP1.95□□□□□ -2.1
VPS55YJR044C YLR001CQ07895 862 aa1.95□□□□□ -2.1
VPS55YJR044C PCL8Q08966 492 aa1.95□□□□□ -2.1
VPS55YJR044C YLR125WQ12138 136 aa1.95□□□□□ -2.1
VPS55YJR044C GIN4Q12263 1142 aa1.95□□□□□ -2.1
VPS55YJR044C PHO2P07269 559 aa1.94□□□□□ -2.1
VPS55YJR044C TOM20P35180 183 aa1.94□□□□□ -2.1
VPS55YJR044C YKR075CP36155 307 aa1.94□□□□□ -2.1
VPS55YJR044C GND1P38720 489 aaKnown RBP1.94□□□□□ -2.1
VPS55YJR044C YIR016WP40572 265 aa1.94□□□□□ -2.1
VPS55YJR044C SAP4P53036 818 aa1.94□□□□□ -2.1
VPS55YJR044C MET13P53128 600 aa1.94□□□□□ -2.1
VPS55YJR044C ALG12P53730 551 aa1.94□□□□□ -2.1
VPS55YJR044C FDC1Q03034 503 aa1.94□□□□□ -2.1
VPS55YJR044C UGO1Q03327 502 aa1.94□□□□□ -2.1
VPS55YJR044C YMR210WQ03649 449 aa1.94□□□□□ -2.1
VPS55YJR044C UTP14Q04500 899 aaKnown RBP1.94□□□□□ -2.1
VPS55YJR044C NTG2Q08214 380 aa1.94□□□□□ -2.1
VPS55YJR044C NRT1Q08485 598 aa1.94□□□□□ -2.1
VPS55YJR044C PRP22P24384 1145 aaKnown RBP1.93□□□□□ -2.1
VPS55YJR044C THI4P32318 326 aa1.93□□□□□ -2.1
VPS55YJR044C SFP1P32432 683 aa1.93□□□□□ -2.1
VPS55YJR044C YOX1P34161 385 aa1.93□□□□□ -2.1
VPS55YJR044C SDS24P38314 527 aa1.93□□□□□ -2.1
VPS55YJR044C MNN1P39106 762 aa1.93□□□□□ -2.1
VPS55YJR044C FTR1P40088 404 aa1.93□□□□□ -2.1
VPS55YJR044C CFD1P40558 293 aa1.93□□□□□ -2.1
VPS55YJR044C PXA1P41909 870 aa1.93□□□□□ -2.1
VPS55YJR044C TDA10P42938 290 aa1.93□□□□□ -2.1
VPS55YJR044C SPO1P53541 631 aa1.93□□□□□ -2.1
VPS55YJR044C WAR1Q03631 944 aa1.93□□□□□ -2.1
VPS55YJR044C COG8Q04632 607 aa1.93□□□□□ -2.1
VPS55YJR044C SPN1Q06505 410 aaPredicted RBP1.93□□□□□ -2.1
VPS55YJR044C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
VPS55YJR044C SSB1P11484 613 aaKnown RBP1.92□□□□□ -2.1
VPS55YJR044C YCR043CP25361 127 aa1.92□□□□□ -2.1
VPS55YJR044C GRX7P38068 203 aa1.92□□□□□ -2.1
VPS55YJR044C YPT10P38146 199 aa1.92□□□□□ -2.1
VPS55YJR044C CDS1P38221 457 aa1.92□□□□□ -2.1
VPS55YJR044C SSB2P40150 613 aaKnown RBP1.92□□□□□ -2.1
VPS55YJR044C MDV1P47025 714 aa1.92□□□□□ -2.1
VPS55YJR044C YGL260WP53056 76 aa1.92□□□□□ -2.1
VPS55YJR044C YGL081WP53156 320 aa1.92□□□□□ -2.1
VPS55YJR044C CEF1Q03654 590 aaPredicted RBP1.92□□□□□ -2.1
VPS55YJR044C STP4Q07351 490 aa1.92□□□□□ -2.1
VPS55YJR044C SWI6P09959 803 aa1.91□□□□□ -2.1
VPS55YJR044C ACO1P19414 778 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
VPS55YJR044C AIM17P23180 465 aaKnown RBP1.91□□□□□ -2.1
VPS55YJR044C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
VPS55YJR044C COQ3P27680 312 aa1.91□□□□□ -2.1
VPS55YJR044C YJU2P28320 278 aaPredicted RBP1.91□□□□□ -2.1
VPS55YJR044C PRE4P30657 266 aa1.91□□□□□ -2.1
VPS55YJR044C MAL31P38156 614 aa1.91□□□□□ -2.1
VPS55YJR044C EHT1P38295 451 aa1.91□□□□□ -2.1
VPS55YJR044C IRC7P43623 340 aa1.91□□□□□ -2.1
VPS55YJR044C VPS72Q03388 795 aa1.91□□□□□ -2.1
VPS55YJR044C GFD1Q04839 188 aaKnown RBP1.91□□□□□ -2.1
VPS55YJR044C RPS17AP02407 136 aaKnown RBP1.9□□□□□ -2.11
VPS55YJR044C GAL4P04386 881 aa1.9□□□□□ -2.11
VPS55YJR044C RPS17BP14127 136 aaKnown RBP1.9□□□□□ -2.11
VPS55YJR044C HOP1P20050 605 aa1.9□□□□□ -2.11
VPS55YJR044C RPT3P33298 428 aaKnown RBP1.9□□□□□ -2.11
VPS55YJR044C LOT5P34234 306 aa1.9□□□□□ -2.11
VPS55YJR044C YIL152WP40455 235 aa1.9□□□□□ -2.11
VPS55YJR044C HRD3Q05787 833 aa1.9□□□□□ -2.11
VPS55YJR044C GUD1Q07729 489 aa1.9□□□□□ -2.11
VPS55YJR044C TGS1Q12052 315 aa1.9□□□□□ -2.11
VPS55YJR044C MTC7P32633 139 aa1.89□□□□□ -2.11
VPS55YJR044C CCL1P37366 393 aa1.89□□□□□ -2.11
VPS55YJR044C MTG2P38860 518 aa1.89□□□□□ -2.11
VPS55YJR044C YEL025CP39991 1188 aa1.89□□□□□ -2.11
VPS55YJR044C YEN1P40028 759 aa1.89□□□□□ -2.11
VPS55YJR044C YIL092WP40497 633 aa1.89□□□□□ -2.11
VPS55YJR044C TES1P41903 349 aaKnown RBP1.89□□□□□ -2.11
VPS55YJR044C YJR142WP47173 342 aa1.89□□□□□ -2.11
VPS55YJR044C HLJ1P48353 224 aa1.89□□□□□ -2.11
VPS55YJR044C NOP15P53927 220 aaPredicted RBP1.89□□□□□ -2.11
VPS55YJR044C BOP3P53958 396 aa1.89□□□□□ -2.11
VPS55YJR044C AAT1Q01802 451 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms