RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W YJR079WP47126 109 aa7.16□□□□□ -1.26
APE4YHR113W CDC55Q00362 526 aa7.16□□□□□ -1.26
APE4YHR113W TFB3Q03290 321 aa7.16□□□□□ -1.26
APE4YHR113W VPS60Q03390 229 aa7.16□□□□□ -1.26
APE4YHR113W PMT7Q06644 662 aa7.16□□□□□ -1.26
APE4YHR113W AIM41Q12032 185 aa7.16□□□□□ -1.26
APE4YHR113W SPE3Q12074 293 aaKnown RBP7.16□□□□□ -1.26
APE4YHR113W YPK1P12688 680 aaKnown RBP7.15□□□□□ -1.27
APE4YHR113W EST1P17214 699 aaPredicted RBP7.15□□□□□ -1.27
APE4YHR113W MET16P18408 261 aaPredicted RBP7.15□□□□□ -1.27
APE4YHR113W RAM1P22007 431 aa7.15□□□□□ -1.27
APE4YHR113W MEI4P29467 408 aa7.15□□□□□ -1.27
APE4YHR113W ECM13P38195 257 aa7.15□□□□□ -1.27
APE4YHR113W MKT1P40850 830 aaKnown RBP7.15□□□□□ -1.27
APE4YHR113W PEX31P53203 462 aa7.15□□□□□ -1.27
APE4YHR113W LEE1Q02799 301 aaKnown RBP7.15□□□□□ -1.27
APE4YHR113W SND1Q04007 877 aa7.15□□□□□ -1.27
APE4YHR113W URH1Q04179 340 aa7.15□□□□□ -1.27
APE4YHR113W DAP1Q12091 152 aa7.15□□□□□ -1.27
APE4YHR113W LPX1Q12405 387 aaKnown RBP7.15□□□□□ -1.27
APE4YHR113W PDR1P12383 1068 aa7.14□□□□□ -1.27
APE4YHR113W BET2P20133 325 aa7.14□□□□□ -1.27
APE4YHR113W SIR1P21691 654 aa7.14□□□□□ -1.27
APE4YHR113W SLY1P22213 666 aa7.14□□□□□ -1.27
APE4YHR113W CAP1P28495 268 aaKnown RBP7.14□□□□□ -1.27
APE4YHR113W KTR4P38131 464 aa7.14□□□□□ -1.27
APE4YHR113W SAF1P38352 637 aa7.14□□□□□ -1.27
APE4YHR113W MED6P38782 295 aa7.14□□□□□ -1.27
APE4YHR113W YIL161WP40449 235 aaKnown RBP7.14□□□□□ -1.27
APE4YHR113W MAD1P40957 749 aa7.14□□□□□ -1.27
APE4YHR113W YJL045WP47052 634 aa7.14□□□□□ -1.27
APE4YHR113W COQ6P53318 479 aa7.14□□□□□ -1.27
APE4YHR113W YNL108CP53929 270 aa7.14□□□□□ -1.27
APE4YHR113W PML39Q03760 334 aa7.14□□□□□ -1.27
APE4YHR113W POB3Q04636 552 aaKnown RBP7.14□□□□□ -1.27
APE4YHR113W KAP95Q06142 861 aaKnown RBP7.14□□□□□ -1.27
APE4YHR113W BSP1Q06604 576 aa7.14□□□□□ -1.27
APE4YHR113W CIR2Q08822 631 aa7.14□□□□□ -1.27
APE4YHR113W HIS1P00498 297 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W ENO2P00925 437 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W TUB3P09734 445 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W IMG2P25642 146 aaPredicted RBP7.13□□□□□ -1.27
APE4YHR113W HXT3P32466 567 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W TIF5P38431 405 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W SAK1P38990 1142 aa7.13□□□□□ -1.27
APE4YHR113W END3P39013 349 aa7.13□□□□□ -1.27
APE4YHR113W PRM9P39551 298 aa7.13□□□□□ -1.27
APE4YHR113W FLC2P39719 783 aa7.13□□□□□ -1.27
APE4YHR113W UBP7P40453 1071 aa7.13□□□□□ -1.27
APE4YHR113W EMW1P42842 904 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W ATG36P46983 293 aa7.13□□□□□ -1.27
APE4YHR113W MNN11P46985 422 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W DAN4P47179 1161 aa7.13□□□□□ -1.27
APE4YHR113W TAN1P53072 289 aaPredicted RBP7.13□□□□□ -1.27
APE4YHR113W RIM8P53179 542 aa7.13□□□□□ -1.27
APE4YHR113W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
APE4YHR113W PIR3Q03180 325 aa7.13□□□□□ -1.27
APE4YHR113W ARA2Q04212 335 aa7.13□□□□□ -1.27
APE4YHR113W RRB1Q04225 511 aaKnown RBP7.13□□□□□ -1.27
APE4YHR113W AIM32Q04689 311 aa7.13□□□□□ -1.27
APE4YHR113W TPO1Q07824 586 aa7.13□□□□□ -1.27
APE4YHR113W IZH4Q99393 312 aa7.13□□□□□ -1.27
APE4YHR113W STE11P23561 717 aa7.12□□□□□ -1.27
APE4YHR113W PPH22P23595 377 aa7.12□□□□□ -1.27
APE4YHR113W PUP3P25451 205 aaKnown RBP7.12□□□□□ -1.27
APE4YHR113W SGF29P25554 259 aa7.12□□□□□ -1.27
APE4YHR113W DPB3P27344 201 aa7.12□□□□□ -1.27
APE4YHR113W YEL043WP32618 956 aa7.12□□□□□ -1.27
APE4YHR113W SEC6P32844 805 aa7.12□□□□□ -1.27
APE4YHR113W SGE1P33335 543 aa7.12□□□□□ -1.27
APE4YHR113W BYE1P36106 594 aa7.12□□□□□ -1.27
APE4YHR113W LAM1P38851 1228 aa7.12□□□□□ -1.27
APE4YHR113W CCT4P39078 528 aaKnown RBP7.12□□□□□ -1.27
APE4YHR113W LSB6P42951 607 aa7.12□□□□□ -1.27
APE4YHR113W RGD2P43556 714 aa7.12□□□□□ -1.27
APE4YHR113W RPS0BP46654 252 aaKnown RBP7.12□□□□□ -1.27
APE4YHR113W PRP24P49960 444 aaKnown RBP7.12□□□□□ -1.27
APE4YHR113W TRM112P53738 135 aaPredicted RBP7.12□□□□□ -1.27
APE4YHR113W YHM2Q04013 314 aa7.12□□□□□ -1.27
APE4YHR113W TMN2Q04562 672 aa7.12□□□□□ -1.27
APE4YHR113W ECI1Q05871 280 aa7.12□□□□□ -1.27
APE4YHR113W THI7Q05998 598 aa7.12□□□□□ -1.27
APE4YHR113W YDL073WQ07454 984 aa7.12□□□□□ -1.27
APE4YHR113W YDR018CQ12185 396 aa7.12□□□□□ -1.27
APE4YHR113W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
APE4YHR113W EFG1Q3E705 233 aaKnown RBP7.12□□□□□ -1.27
APE4YHR113W SEY1Q99287 776 aa7.12□□□□□ -1.27
APE4YHR113W RAD10P06838 210 aa7.11□□□□□ -1.27
APE4YHR113W PPZ1P26570 692 aa7.11□□□□□ -1.27
APE4YHR113W PBP2P38151 413 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
APE4YHR113W MSG5P38590 489 aa7.11□□□□□ -1.27
APE4YHR113W FSH1P38777 243 aaKnown RBP7.11□□□□□ -1.27
APE4YHR113W YMR134WP40207 237 aa7.11□□□□□ -1.27
APE4YHR113W MVP1P40959 511 aaKnown RBP7.11□□□□□ -1.27
APE4YHR113W BST1P43571 1029 aa7.11□□□□□ -1.27
APE4YHR113W RRT5P43607 289 aa7.11□□□□□ -1.27
APE4YHR113W RTT101P47050 842 aa7.11□□□□□ -1.27
APE4YHR113W YGR127WP53275 312 aa7.11□□□□□ -1.27
APE4YHR113W TOF2Q02208 771 aa7.11□□□□□ -1.27
APE4YHR113W HOS3Q02959 697 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms