RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeast

Gene PRP38, Length 729 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP38	YGR075C	ARR3	Q06598	404 aa		4.31	□□□□□ -1.72
PRP38	YGR075C	AIM41	Q12032	185 aa		4.31	□□□□□ -1.72
PRP38	YGR075C	RGT2	Q12300	763 aa		4.31	□□□□□ -1.72
PRP38	YGR075C	FRE7	Q12333	620 aa		4.31	□□□□□ -1.72
PRP38	YGR075C	LRO1	P40345	661 aa		4.3	□□□□□ -1.72
PRP38	YGR075C	ULP2	P40537	1034 aa	Predicted RBP	4.3	□□□□□ -1.72
PRP38	YGR075C	SEC3	P33332	1336 aa	Known RBP	4.29	□□□□□ -1.72
PRP38	YGR075C	HEM1	P09950	548 aa	Predicted RBP	4.29	□□□□□ -1.72
PRP38	YGR075C	AQY1	P0CD91	305 aa		4.29	□□□□□ -1.72
PRP38	YGR075C	WHI2	P12611	486 aa		4.29	□□□□□ -1.72
PRP38	YGR075C	HXT4	P32467	576 aa		4.29	□□□□□ -1.72
PRP38	YGR075C	ENP2	P48234	707 aa	Known RBP	4.29	□□□□□ -1.72
PRP38	YGR075C	CAP1	P28495	268 aa	Known RBP	4.28	□□□□□ -1.72
PRP38	YGR075C	SER1	P33330	395 aa	Known RBP	4.28	□□□□□ -1.72
PRP38	YGR075C	LOT5	P34234	306 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	YFL015C	P43578	164 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	SAP4	P53036	818 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	ATP23	P53722	227 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	STP1	Q00947	519 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	USA1	Q03714	838 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	YGR161W-C	Q3E744	92 aa		4.28	□□□□□ -1.72
PRP38	YGR075C	RNR3	P21672	869 aa	Known RBP	4.27	□□□□□ -1.73
PRP38	YGR075C	DAL3	P32459	195 aa		4.27	□□□□□ -1.73
PRP38	YGR075C	PSA1	P41940	361 aa	Known RBP	4.27	□□□□□ -1.73
PRP38	YGR075C	YGR237C	P50089	785 aa		4.27	□□□□□ -1.73
PRP38	YGR075C	ORM2	Q06144	216 aa		4.27	□□□□□ -1.73
PRP38	YGR075C	IRC3	Q06683	689 aa		4.27	□□□□□ -1.73
PRP38	YGR075C	FAP7	Q12055	197 aa	Predicted RBP	4.27	□□□□□ -1.73
PRP38	YGR075C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
PRP38	YGR075C	ATP12	P22135	325 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	ECM32	P32644	1121 aa	Known RBP	4.26	□□□□□ -1.73
PRP38	YGR075C	BEM3	P32873	1128 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	RPC34	P32910	317 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	CCL1	P37366	393 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	YPT10	P38146	199 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	FPR3	P38911	411 aa	Known RBP	4.26	□□□□□ -1.73
PRP38	YGR075C	YJL043W	P47053	257 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	RNR4	P49723	345 aa	Known RBP	4.26	□□□□□ -1.73
PRP38	YGR075C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PRP38	YGR075C	TGS1	Q12052	315 aa		4.26	□□□□□ -1.73
PRP38	YGR075C	YMR084W	A2P2R3	262 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	VPS33	P20795	691 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	DGR2	P32330	852 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	RMA1	P36001	430 aa	Known RBP	4.25	□□□□□ -1.73
PRP38	YGR075C	YJL193W	P39542	402 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	EXO1	P39875	702 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	BST1	P43571	1029 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	NGL1	Q08213	363 aa	Known RBP	4.25	□□□□□ -1.73
PRP38	YGR075C	PCL8	Q08966	492 aa		4.25	□□□□□ -1.73
PRP38	YGR075C	GSY2	P27472	705 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	BRN1	P38170	754 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	ATG36	P46983	293 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	PEF1	P53238	335 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	SQS1	P53866	767 aa	Known RBP	4.24	□□□□□ -1.73
PRP38	YGR075C	MPS1	P54199	764 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	CIR2	Q08822	631 aa		4.24	□□□□□ -1.73
PRP38	YGR075C	TDA10	P42938	290 aa		4.23	□□□□□ -1.73
PRP38	YGR075C	GFD1	Q04839	188 aa	Known RBP	4.23	□□□□□ -1.73
PRP38	YGR075C	GEP3	Q08622	556 aa		4.23	□□□□□ -1.73
PRP38	YGR075C	YPR027C	Q12079	277 aa		4.23	□□□□□ -1.73
PRP38	YGR075C	PRS5	Q12265	496 aa	Known RBP	4.23	□□□□□ -1.73
PRP38	YGR075C	TUF1	P02992	437 aa	Known RBP	4.22	□□□□□ -1.73
PRP38	YGR075C	MRPL9	P31334	269 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	APD1	P38281	316 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	IRC5	P43610	853 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	NMD5	P46970	1048 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	BPL1	P48445	690 aa	Predicted RBP	4.22	□□□□□ -1.73
PRP38	YGR075C	WAR1	Q03631	944 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	BSP1	Q06604	576 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	YLR111W	Q12528	110 aa		4.22	□□□□□ -1.73
PRP38	YGR075C	PCK1	P10963	549 aa		4.21	□□□□□ -1.74
PRP38	YGR075C	GPP2	P40106	250 aa	Known RBP	4.21	□□□□□ -1.74
PRP38	YGR075C	RSC9	Q03124	581 aa		4.21	□□□□□ -1.74
PRP38	YGR075C	YEL076C-A	P0CX16	216 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	YLR464W	P0CX17	216 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	YJU2	P28320	278 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP38	YGR075C	DSS4	P32601	143 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	SRP68	P38687	599 aa	Known RBP	4.2	□□□□□ -1.74
PRP38	YGR075C	YEL076C	P39971	216 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	OPT1	P40897	799 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	SNO3	P43544	222 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	ERG13	P54839	491 aa	Known RBP	4.2	□□□□□ -1.74
PRP38	YGR075C	SKY1	Q03656	742 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	RDL1	Q12305	139 aa	Known RBP	4.2	□□□□□ -1.74
PRP38	YGR075C	VPS5	Q92331	675 aa		4.2	□□□□□ -1.74
PRP38	YGR075C	AAC1	P04710	309 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	AEP2	P22136	580 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	PEA2	P40091	420 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	DUG1	P43616	481 aa	Known RBP	4.19	□□□□□ -1.74
PRP38	YGR075C	SAE2	P46946	345 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	YNL092W	P53934	400 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	MTD1	Q02046	320 aa	Known RBP	4.19	□□□□□ -1.74
PRP38	YGR075C	SPN1	Q06505	410 aa	Predicted RBP	4.19	□□□□□ -1.74
PRP38	YGR075C	RMP1	Q12530	201 aa		4.19	□□□□□ -1.74
PRP38	YGR075C	NIT2	P47016	307 aa		4.18	□□□□□ -1.74
PRP38	YGR075C	MNT2	P53059	558 aa		4.18	□□□□□ -1.74
PRP38	YGR075C	YPL068C	Q02749	293 aa		4.18	□□□□□ -1.74
PRP38	YGR075C	YOR378W	Q08902	515 aa		4.18	□□□□□ -1.74
PRP38	YGR075C	YPK1	P12688	680 aa	Known RBP	4.17	□□□□□ -1.74
PRP38	YGR075C	TSR4	P25040	408 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms