RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W YPT10P38146 199 aa4.41□□□□□ -1.7
SHE9YDR393W TDA10P42938 290 aa4.41□□□□□ -1.7
SHE9YDR393W LSC1P53598 329 aaKnown RBP4.41□□□□□ -1.7
SHE9YDR393W SPN1Q06505 410 aaPredicted RBP4.41□□□□□ -1.7
SHE9YDR393W NEW1Q08972 1196 aaKnown RBP4.41□□□□□ -1.7
SHE9YDR393W TGS1Q12052 315 aa4.41□□□□□ -1.7
SHE9YDR393W YMR085WP0CF18 432 aa4.4□□□□□ -1.7
SHE9YDR393W BRN1P38170 754 aa4.4□□□□□ -1.7
SHE9YDR393W DUN1P39009 513 aa4.4□□□□□ -1.7
SHE9YDR393W YEL025CP39991 1188 aa4.4□□□□□ -1.7
SHE9YDR393W USA1Q03714 838 aa4.4□□□□□ -1.7
SHE9YDR393W PCL8Q08966 492 aa4.4□□□□□ -1.7
SHE9YDR393W CAP1P28495 268 aaKnown RBP4.4□□□□□ -1.71
SHE9YDR393W MTC7P32633 139 aa4.4□□□□□ -1.71
SHE9YDR393W EHT1P38295 451 aa4.4□□□□□ -1.71
SHE9YDR393W SAE2P46946 345 aa4.4□□□□□ -1.71
SHE9YDR393W WAR1Q03631 944 aa4.4□□□□□ -1.71
SHE9YDR393W ARR3Q06598 404 aa4.4□□□□□ -1.71
SHE9YDR393W HER1Q12276 1246 aa4.4□□□□□ -1.71
SHE9YDR393W RPS21BQ3E754 87 aaKnown RBP4.4□□□□□ -1.71
SHE9YDR393W YPR089WO13585 888 aa4.39□□□□□ -1.71
SHE9YDR393W CCL1P37366 393 aa4.39□□□□□ -1.71
SHE9YDR393W LRO1P40345 661 aa4.39□□□□□ -1.71
SHE9YDR393W MAF1P41910 395 aa4.39□□□□□ -1.71
SHE9YDR393W YDL183CP48569 320 aa4.39□□□□□ -1.71
SHE9YDR393W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SHE9YDR393W YER190C-BP0CX94 160 aa4.38□□□□□ -1.71
SHE9YDR393W YEL077W-AP0CX95 160 aa4.38□□□□□ -1.71
SHE9YDR393W YGR296C-BP0CX96 160 aa4.38□□□□□ -1.71
SHE9YDR393W YPL283W-BP0CX97 160 aa4.38□□□□□ -1.71
SHE9YDR393W YPR204C-AP0CX98 160 aa4.38□□□□□ -1.71
SHE9YDR393W GLN4P13188 809 aaKnown RBP4.38□□□□□ -1.71
SHE9YDR393W YIL024CP40543 189 aa4.38□□□□□ -1.71
SHE9YDR393W NUP53Q03790 475 aa4.38□□□□□ -1.71
SHE9YDR393W CKB2P38930 258 aa4.37□□□□□ -1.71
SHE9YDR393W YMR124WP39523 943 aaKnown RBP4.37□□□□□ -1.71
SHE9YDR393W TPO3Q06451 622 aa4.37□□□□□ -1.71
SHE9YDR393W YCG1Q06680 1035 aa4.37□□□□□ -1.71
SHE9YDR393W AIM41Q12032 185 aa4.37□□□□□ -1.71
SHE9YDR393W YJU2P28320 278 aaPredicted RBP4.36□□□□□ -1.71
SHE9YDR393W SEC65P29478 273 aa4.36□□□□□ -1.71
SHE9YDR393W GCS1P35197 352 aa4.36□□□□□ -1.71
SHE9YDR393W HXT6P39003 570 aaKnown RBP4.36□□□□□ -1.71
SHE9YDR393W HXT7P39004 570 aa4.36□□□□□ -1.71
SHE9YDR393W OAF1P39720 1047 aaPredicted RBP4.36□□□□□ -1.71
SHE9YDR393W YJR096WP47137 282 aa4.36□□□□□ -1.71
SHE9YDR393W GIS2P53849 153 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SHE9YDR393W ORC1P54784 914 aaPredicted RBP4.36□□□□□ -1.71
SHE9YDR393W CCT4P39078 528 aaKnown RBP4.35□□□□□ -1.71
SHE9YDR393W SDA1P53313 767 aaKnown RBP4.35□□□□□ -1.71
SHE9YDR393W YPT1P01123 206 aaKnown RBP4.34□□□□□ -1.71
SHE9YDR393W MGM1P32266 881 aa4.34□□□□□ -1.71
SHE9YDR393W YHR033WP38690 423 aa4.34□□□□□ -1.71
SHE9YDR393W CFD1P40558 293 aa4.34□□□□□ -1.71
SHE9YDR393W YGR153WP48238 217 aa4.34□□□□□ -1.71
SHE9YDR393W COP1P53622 1201 aaKnown RBP4.34□□□□□ -1.71
SHE9YDR393W YPL071CQ02864 156 aa4.34□□□□□ -1.71
SHE9YDR393W HRD3Q05787 833 aa4.34□□□□□ -1.71
SHE9YDR393W CDC26P14724 124 aa4.33□□□□□ -1.72
SHE9YDR393W OAF3P36023 863 aa4.33□□□□□ -1.72
SHE9YDR393W ECM9Q02202 377 aa4.33□□□□□ -1.72
SHE9YDR393W MRPL1Q04599 285 aa4.33□□□□□ -1.72
SHE9YDR393W HMG2P12684 1045 aa4.32□□□□□ -1.72
SHE9YDR393W ACO1P19414 778 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SHE9YDR393W YCP4P25349 247 aaKnown RBP4.32□□□□□ -1.72
SHE9YDR393W MF(ALPHA)2P32435 120 aa4.32□□□□□ -1.72
SHE9YDR393W FAT1P38225 669 aa4.32□□□□□ -1.72
SHE9YDR393W VID28P40547 921 aa4.32□□□□□ -1.72
SHE9YDR393W OSW7P43611 510 aa4.32□□□□□ -1.72
SHE9YDR393W AAC1P04710 309 aa4.31□□□□□ -1.72
SHE9YDR393W ENT2Q05785 613 aa4.31□□□□□ -1.72
SHE9YDR393W CYK3Q07533 885 aa4.31□□□□□ -1.72
SHE9YDR393W HFI1Q12060 488 aa4.31□□□□□ -1.72
SHE9YDR393W AHA1Q12449 350 aaKnown RBP4.31□□□□□ -1.72
SHE9YDR393W RPL8AP17076 256 aaKnown RBP4.3□□□□□ -1.72
SHE9YDR393W VPS33P20795 691 aa4.3□□□□□ -1.72
SHE9YDR393W PRP19P32523 503 aaKnown RBP4.3□□□□□ -1.72
SHE9YDR393W ATO2P32907 282 aa4.3□□□□□ -1.72
SHE9YDR393W YJL193WP39542 402 aa4.3□□□□□ -1.72
SHE9YDR393W YIL092WP40497 633 aa4.3□□□□□ -1.72
SHE9YDR393W IRC7P43623 340 aa4.3□□□□□ -1.72
SHE9YDR393W RPL15BP54780 204 aaPredicted RBP4.3□□□□□ -1.72
SHE9YDR393W BUD7Q08754 746 aa4.3□□□□□ -1.72
SHE9YDR393W YHM2Q04013 314 aa4.29□□□□□ -1.72
SHE9YDR393W SRL1Q08673 210 aa4.29□□□□□ -1.72
SHE9YDR393W APM4Q99186 491 aa4.29□□□□□ -1.72
SHE9YDR393W AIM44Q99299 758 aa4.29□□□□□ -1.72
SHE9YDR393W BI2P03873 423 aa4.28□□□□□ -1.72
SHE9YDR393W YEL076C-AP0CX16 216 aa4.28□□□□□ -1.72
SHE9YDR393W YLR464WP0CX17 216 aa4.28□□□□□ -1.72
SHE9YDR393W FLO5P38894 1075 aa4.28□□□□□ -1.72
SHE9YDR393W YEL076CP39971 216 aa4.28□□□□□ -1.72
SHE9YDR393W YAT2P40017 923 aa4.28□□□□□ -1.72
SHE9YDR393W LYS20P48570 428 aaKnown RBP4.28□□□□□ -1.72
SHE9YDR393W RPS21AP0C0V8 87 aaKnown RBP4.27□□□□□ -1.73
SHE9YDR393W YPK1P12688 680 aaKnown RBP4.27□□□□□ -1.73
SHE9YDR393W COQ3P27680 312 aa4.27□□□□□ -1.73
SHE9YDR393W YNL092WP53934 400 aa4.27□□□□□ -1.73
SHE9YDR393W SNA4Q07549 140 aa4.27□□□□□ -1.73
SHE9YDR393W NDD1Q08887 554 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms