RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C AQY1P0CD91 305 aa2.67□□□□□ -1.98
PCF11YDR228C GSY2P27472 705 aa2.67□□□□□ -1.98
PCF11YDR228C BEM3P32873 1128 aa2.67□□□□□ -1.98
PCF11YDR228C DHR2P36009 735 aaPredicted RBP2.67□□□□□ -1.98
PCF11YDR228C DID4P36108 232 aa2.67□□□□□ -1.98
PCF11YDR228C VID28P40547 921 aa2.67□□□□□ -1.98
PCF11YDR228C PSA1P41940 361 aaKnown RBP2.67□□□□□ -1.98
PCF11YDR228C TDA10P42938 290 aa2.67□□□□□ -1.98
PCF11YDR228C MPS1P54199 764 aa2.67□□□□□ -1.98
PCF11YDR228C YCG1Q06680 1035 aa2.67□□□□□ -1.98
PCF11YDR228C GEP3Q08622 556 aa2.67□□□□□ -1.98
PCF11YDR228C YUR1P26725 428 aa2.67□□□□□ -1.98
PCF11YDR228C RPC34P32910 317 aa2.67□□□□□ -1.98
PCF11YDR228C EHT1P38295 451 aa2.67□□□□□ -1.98
PCF11YDR228C YEL025CP39991 1188 aa2.67□□□□□ -1.98
PCF11YDR228C ENP2P48234 707 aaKnown RBP2.67□□□□□ -1.98
PCF11YDR228C HLJ1P48353 224 aa2.67□□□□□ -1.98
PCF11YDR228C YNR029CP53729 429 aaKnown RBP2.67□□□□□ -1.98
PCF11YDR228C YHM2Q04013 314 aa2.67□□□□□ -1.98
PCF11YDR228C YPL216WQ08964 1102 aa2.67□□□□□ -1.98
PCF11YDR228C TUF1P02992 437 aaKnown RBP2.66□□□□□ -1.98
PCF11YDR228C HEM1P09950 548 aaPredicted RBP2.66□□□□□ -1.98
PCF11YDR228C HMG2P12684 1045 aa2.66□□□□□ -1.98
PCF11YDR228C LOT5P34234 306 aa2.66□□□□□ -1.98
PCF11YDR228C CCL1P37366 393 aa2.66□□□□□ -1.98
PCF11YDR228C APD1P38281 316 aa2.66□□□□□ -1.98
PCF11YDR228C GPP1P41277 250 aaKnown RBP2.66□□□□□ -1.98
PCF11YDR228C YFL015CP43578 164 aa2.66□□□□□ -1.98
PCF11YDR228C PMT3P47190 753 aa2.66□□□□□ -1.98
PCF11YDR228C ATP23P53722 227 aa2.66□□□□□ -1.98
PCF11YDR228C STP1Q00947 519 aa2.66□□□□□ -1.98
PCF11YDR228C PTA1Q01329 785 aaPredicted RBP2.66□□□□□ -1.98
PCF11YDR228C AIM41Q12032 185 aa2.66□□□□□ -1.98
PCF11YDR228C TGS1Q12052 315 aa2.66□□□□□ -1.98
PCF11YDR228C BRN1P38170 754 aa2.65□□□□□ -1.98
PCF11YDR228C BPL1P48445 690 aaPredicted RBP2.65□□□□□ -1.98
PCF11YDR228C UME1Q03010 460 aa2.65□□□□□ -1.98
PCF11YDR228C ORM2Q06144 216 aa2.65□□□□□ -1.98
PCF11YDR228C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.65□□□□□ -1.98not detected
PCF11YDR228C VPS33P20795 691 aa2.65□□□□□ -1.99
PCF11YDR228C RNR3P21672 869 aaKnown RBP2.65□□□□□ -1.99
PCF11YDR228C RMA1P36001 430 aaKnown RBP2.65□□□□□ -1.99
PCF11YDR228C YHR033WP38690 423 aa2.65□□□□□ -1.99
PCF11YDR228C ATG36P46983 293 aa2.65□□□□□ -1.99
PCF11YDR228C GFD1Q04839 188 aaKnown RBP2.65□□□□□ -1.99
PCF11YDR228C SPN1Q06505 410 aaPredicted RBP2.65□□□□□ -1.99
PCF11YDR228C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
PCF11YDR228C YLR111WQ12528 110 aa2.65□□□□□ -1.99
PCF11YDR228C YJU2P28320 278 aaPredicted RBP2.64□□□□□ -1.99
PCF11YDR228C HXT4P32467 576 aa2.64□□□□□ -1.99
PCF11YDR228C YJL193WP39542 402 aa2.64□□□□□ -1.99
PCF11YDR228C OPT1P40897 799 aa2.64□□□□□ -1.99
PCF11YDR228C PEF1P53238 335 aa2.64□□□□□ -1.99
PCF11YDR228C RSC9Q03124 581 aa2.64□□□□□ -1.99
PCF11YDR228C BSP1Q06604 576 aa2.64□□□□□ -1.99
PCF11YDR228C PCL8Q08966 492 aa2.64□□□□□ -1.99
PCF11YDR228C RDL1Q12305 139 aaKnown RBP2.64□□□□□ -1.99
PCF11YDR228C AAC1P04710 309 aa2.63□□□□□ -1.99
PCF11YDR228C ATP12P22135 325 aa2.63□□□□□ -1.99
PCF11YDR228C SAE2P46946 345 aa2.63□□□□□ -1.99
PCF11YDR228C YJR142WP47173 342 aa2.63□□□□□ -1.99
PCF11YDR228C PRS5Q12265 496 aaKnown RBP2.63□□□□□ -1.99
PCF11YDR228C SEC3P33332 1336 aaKnown RBP2.63□□□□□ -1.99
PCF11YDR228C DGR2P32330 852 aa2.62□□□□□ -1.99
PCF11YDR228C SNO3P43544 222 aa2.62□□□□□ -1.99
PCF11YDR228C IRC5P43610 853 aa2.62□□□□□ -1.99
PCF11YDR228C WAR1Q03631 944 aa2.62□□□□□ -1.99
PCF11YDR228C SER1P33330 395 aaKnown RBP2.62□□□□□ -1.99
PCF11YDR228C IRC8P47046 822 aa2.62□□□□□ -1.99
PCF11YDR228C YJL043WP47053 257 aa2.62□□□□□ -1.99
PCF11YDR228C YNL092WP53934 400 aa2.62□□□□□ -1.99
PCF11YDR228C IDP3P53982 420 aaKnown RBP2.62□□□□□ -1.99
PCF11YDR228C ERG13P54839 491 aaKnown RBP2.62□□□□□ -1.99
PCF11YDR228C TDA9Q04545 1251 aa2.62□□□□□ -1.99
PCF11YDR228C HRD3Q05787 833 aa2.62□□□□□ -1.99
PCF11YDR228C NGL1Q08213 363 aaKnown RBP2.62□□□□□ -1.99
PCF11YDR228C YPT1P01123 206 aaKnown RBP2.61□□□□□ -1.99
PCF11YDR228C MRPL9P31334 269 aa2.61□□□□□ -1.99
PCF11YDR228C CDC5P32562 705 aa2.61□□□□□ -1.99
PCF11YDR228C SRP68P38687 599 aaKnown RBP2.61□□□□□ -1.99
PCF11YDR228C GPP2P40106 250 aaKnown RBP2.61□□□□□ -1.99
PCF11YDR228C SCS3P53012 380 aa2.61□□□□□ -1.99
PCF11YDR228C TSR4P25040 408 aa2.6□□□□□ -1.99
PCF11YDR228C CWH43P25618 953 aa2.6□□□□□ -1.99
PCF11YDR228C EUG1P32474 517 aa2.6□□□□□ -1.99
PCF11YDR228C DSS4P32601 143 aa2.6□□□□□ -1.99
PCF11YDR228C DUG1P43616 481 aaKnown RBP2.6□□□□□ -1.99
PCF11YDR228C STB2P46679 850 aa2.6□□□□□ -1.99
PCF11YDR228C YGR237CP50089 785 aa2.6□□□□□ -1.99
PCF11YDR228C NUP145P49687 1317 aa2.6□□□□□ -1.99
PCF11YDR228C AEP2P22136 580 aa2.6□□□□□ -1.99
PCF11YDR228C MAK32P23060 363 aa2.6□□□□□ -1.99
PCF11YDR228C DAL3P32459 195 aa2.6□□□□□ -1.99
PCF11YDR228C MNT3P40549 630 aa2.6□□□□□ -1.99
PCF11YDR228C RNR4P49723 345 aaKnown RBP2.6□□□□□ -1.99
PCF11YDR228C VPS5Q92331 675 aa2.6□□□□□ -1.99
PCF11YDR228C YEL076C-AP0CX16 216 aa2.59□□□□□ -1.99
PCF11YDR228C YLR464WP0CX17 216 aa2.59□□□□□ -1.99
PCF11YDR228C YER190C-BP0CX94 160 aa2.59□□□□□ -1.99
PCF11YDR228C YEL077W-AP0CX95 160 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms