RNA–Protein interactions for RNA: YDR174W

HMO1, Transcript of Chromatin associated high mobility group (HMG) family member, yeast

Gene HMO1, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMO1	YDR174W	VPS5	Q92331	675 aa		4.09	□□□□□ -1.75
HMO1	YDR174W	RPA135	P22138	1203 aa	Known RBP	4.08	□□□□□ -1.76
HMO1	YDR174W	MRC1	P25588	1096 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	CNE1	P27825	502 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	EAF5	P39995	279 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	SLD3	P53135	668 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	SQS1	P53866	767 aa	Known RBP	4.08	□□□□□ -1.76
HMO1	YDR174W	ARG7	Q04728	441 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	ECM38	Q05902	660 aa	Predicted RBP	4.08	□□□□□ -1.76
HMO1	YDR174W	OSW1	Q08692	278 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	YOR378W	Q08902	515 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	ULA1	Q12059	462 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	YNL162W-A	Q3E7A8	72 aa		4.08	□□□□□ -1.76
HMO1	YDR174W	SSB1	P11484	613 aa	Known RBP	4.07	□□□□□ -1.76
HMO1	YDR174W	VPS33	P20795	691 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	VPS34	P22543	875 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	CWH43	P25618	953 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	CAP1	P28495	268 aa	Known RBP	4.07	□□□□□ -1.76
HMO1	YDR174W	EMP65	P40085	556 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	SSB2	P40150	613 aa	Known RBP	4.07	□□□□□ -1.76
HMO1	YDR174W	MNT2	P53059	558 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	BUD17	P53727	317 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	USA1	Q03714	838 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	PEX15	Q08215	383 aa		4.07	□□□□□ -1.76
HMO1	YDR174W	CWC2	Q12046	339 aa	Predicted RBP	4.07	□□□□□ -1.76
HMO1	YDR174W	ADE5,7	P07244	802 aa	Known RBP	4.06	□□□□□ -1.76
HMO1	YDR174W	PLC1	P32383	869 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	TFC4	P33339	1025 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	PIH1	P38768	344 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	YJL193W	P39542	402 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	YNL018C	P53976	612 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	MRI1	Q06489	411 aa	Known RBP	4.06	□□□□□ -1.76
HMO1	YDR174W	YPL216W	Q08964	1102 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	RTK1	Q12100	620 aa	Predicted RBP	4.06	□□□□□ -1.76
HMO1	YDR174W	ZPS1	Q12512	249 aa		4.06	□□□□□ -1.76
HMO1	YDR174W	CPA2	P03965	1118 aa	Known RBP	4.05	□□□□□ -1.76
HMO1	YDR174W	PMA2	P19657	947 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	PEX14	P53112	341 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	COQ6	P53318	479 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	HOL1	P53389	586 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	FMP30	Q02883	468 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	YDL073W	Q07454	984 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	SLK19	Q08581	821 aa	Known RBP	4.05	□□□□□ -1.76
HMO1	YDR174W	SLX4	Q12098	748 aa		4.05	□□□□□ -1.76
HMO1	YDR174W	RPL7A	P05737	244 aa	Known RBP	4.04	□□□□□ -1.76
HMO1	YDR174W	KAR1	P11927	433 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	ARG1	P22768	420 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	AAD3	P25612	363 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	CCL1	P37366	393 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	YPT10	P38146	199 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	RIM4	P38741	713 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	STL1	P39932	569 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	MAD2	P40958	196 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	FOL1	P53848	824 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	PHM6	Q05637	104 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	THI7	Q05998	598 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	DIN7	Q12086	430 aa		4.04	□□□□□ -1.76
HMO1	YDR174W	RPL7B	Q12213	244 aa	Known RBP	4.04	□□□□□ -1.76
HMO1	YDR174W	PCK1	P10963	549 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	WHI2	P12611	486 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	HOM2	P13663	365 aa	Known RBP	4.03	□□□□□ -1.76
HMO1	YDR174W	DSS4	P32601	143 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	ORC2	P32833	620 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	LOT5	P34234	306 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	SSP120	P39931	234 aa	Known RBP	4.03	□□□□□ -1.76
HMO1	YDR174W	SAP4	P53036	818 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	YNR071C	P53757	342 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	TGS1	Q12052	315 aa		4.03	□□□□□ -1.76
HMO1	YDR174W	URA3	P03962	267 aa		4.02	□□□□□ -1.77
HMO1	YDR174W	TAX4	P47030	604 aa		4.02	□□□□□ -1.77
HMO1	YDR174W	PIP2	P52960	996 aa		4.02	□□□□□ -1.77
HMO1	YDR174W	SEC12	P11655	471 aa		4.01	□□□□□ -1.77
HMO1	YDR174W	RNR3	P21672	869 aa	Known RBP	4.01	□□□□□ -1.77
HMO1	YDR174W	PET309	P32522	965 aa	Predicted RBP	4.01	□□□□□ -1.77
HMO1	YDR174W	PUS4	P48567	403 aa	Known RBP	4.01	□□□□□ -1.77
HMO1	YDR174W	MDR1	P53258	950 aa		4.01	□□□□□ -1.77
HMO1	YDR174W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
HMO1	YDR174W	PSF3	Q12146	194 aa		4.01	□□□□□ -1.77
HMO1	YDR174W	ERG11	P10614	530 aa		4	□□□□□ -1.77
HMO1	YDR174W	MBR1	P23493	339 aa		4	□□□□□ -1.77
HMO1	YDR174W	HOT13	P36078	116 aa		4	□□□□□ -1.77
HMO1	YDR174W	YIL092W	P40497	633 aa		4	□□□□□ -1.77
HMO1	YDR174W	ATG36	P46983	293 aa		4	□□□□□ -1.77
HMO1	YDR174W	RIM13	Q03792	727 aa		4	□□□□□ -1.77
HMO1	YDR174W	HOF1	Q05080	669 aa		4	□□□□□ -1.77
HMO1	YDR174W	AI5_ALPHA	Q9ZZX1	630 aa		4	□□□□□ -1.77
HMO1	YDR174W	PGK1	P00560	416 aa	Known RBP	3.99	□□□□□ -1.77
HMO1	YDR174W	MDM10	P18409	493 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	PRP45	P28004	379 aa	Predicted RBP	3.99	□□□□□ -1.77
HMO1	YDR174W	YFL015C	P43578	164 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	CNM67	P53865	581 aa	Known RBP	3.99	□□□□□ -1.77
HMO1	YDR174W	YNL034W	P53963	612 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	TGL2	P54857	326 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	SEG1	Q04279	960 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	GFD1	Q04839	188 aa	Known RBP	3.99	□□□□□ -1.77
HMO1	YDR174W	PCL8	Q08966	492 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	HOS1	Q12214	470 aa		3.99	□□□□□ -1.77
HMO1	YDR174W	DBP10	Q12389	995 aa	Known RBP	3.99	□□□□□ -1.77
HMO1	YDR174W	YMR084W	A2P2R3	262 aa		3.98	□□□□□ -1.77
HMO1	YDR174W	AAC1	P04710	309 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms