RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YNL018CP53976 612 aa3.63□□□□□ -1.83
ASM4YDL088C YCG1Q06680 1035 aa3.63□□□□□ -1.83
ASM4YDL088C HFI1Q12060 488 aa3.63□□□□□ -1.83
ASM4YDL088C SEC3P33332 1336 aaKnown RBP3.62□□□□□ -1.83
ASM4YDL088C DGR2P32330 852 aa3.62□□□□□ -1.83
ASM4YDL088C FAT1P38225 669 aa3.62□□□□□ -1.83
ASM4YDL088C MNN11P46985 422 aaKnown RBP3.62□□□□□ -1.83
ASM4YDL088C PMT3P47190 753 aa3.62□□□□□ -1.83
ASM4YDL088C ENP2P48234 707 aaKnown RBP3.62□□□□□ -1.83
ASM4YDL088C ERG13P54839 491 aaKnown RBP3.62□□□□□ -1.83
ASM4YDL088C UME1Q03010 460 aa3.62□□□□□ -1.83
ASM4YDL088C FRE7Q12333 620 aa3.62□□□□□ -1.83
ASM4YDL088C RNR3P21672 869 aaKnown RBP3.61□□□□□ -1.83
ASM4YDL088C DID4P36108 232 aa3.61□□□□□ -1.83
ASM4YDL088C BRN1P38170 754 aa3.61□□□□□ -1.83
ASM4YDL088C OAF1P39720 1047 aaPredicted RBP3.61□□□□□ -1.83
ASM4YDL088C RPS21AP0C0V8 87 aaKnown RBP3.6□□□□□ -1.83
ASM4YDL088C HOP1P20050 605 aa3.6□□□□□ -1.83
ASM4YDL088C TSR4P25040 408 aa3.6□□□□□ -1.83
ASM4YDL088C CCL1P37366 393 aa3.6□□□□□ -1.83
ASM4YDL088C SNO3P43544 222 aa3.6□□□□□ -1.83
ASM4YDL088C SQS1P53866 767 aaKnown RBP3.6□□□□□ -1.83
ASM4YDL088C HMG2P12684 1045 aa3.59□□□□□ -1.83
ASM4YDL088C ACO1P19414 778 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
ASM4YDL088C URE2P23202 354 aaKnown RBP3.59□□□□□ -1.83
ASM4YDL088C NMD2P38798 1089 aaKnown RBP3.59□□□□□ -1.83
ASM4YDL088C EXO1P39875 702 aa3.59□□□□□ -1.83
ASM4YDL088C YFL015CP43578 164 aa3.59□□□□□ -1.83
ASM4YDL088C NMD5P46970 1048 aa3.59□□□□□ -1.83
ASM4YDL088C RPS15Q01855 142 aaKnown RBP3.59□□□□□ -1.83
ASM4YDL088C WAR1Q03631 944 aa3.59□□□□□ -1.83
ASM4YDL088C PRS5Q12265 496 aaKnown RBP3.59□□□□□ -1.83
ASM4YDL088C APM4Q99186 491 aa3.59□□□□□ -1.83
ASM4YDL088C CDC26P14724 124 aa3.59□□□□□ -1.84
ASM4YDL088C LRO1P40345 661 aa3.59□□□□□ -1.84
ASM4YDL088C OPT1P40897 799 aa3.59□□□□□ -1.84
ASM4YDL088C SAP4P53036 818 aa3.59□□□□□ -1.84
ASM4YDL088C GEP3Q08622 556 aa3.59□□□□□ -1.84
ASM4YDL088C FAP7Q12055 197 aaPredicted RBP3.59□□□□□ -1.84
ASM4YDL088C TUF1P02992 437 aaKnown RBP3.58□□□□□ -1.84
ASM4YDL088C MF(ALPHA)2P32435 120 aa3.58□□□□□ -1.84
ASM4YDL088C EUG1P32474 517 aa3.58□□□□□ -1.84
ASM4YDL088C MTC7P32633 139 aa3.58□□□□□ -1.84
ASM4YDL088C YJL193WP39542 402 aa3.58□□□□□ -1.84
ASM4YDL088C BPL1P48445 690 aaPredicted RBP3.58□□□□□ -1.84
ASM4YDL088C RNR4P49723 345 aaKnown RBP3.58□□□□□ -1.84
ASM4YDL088C ARR3Q06598 404 aa3.58□□□□□ -1.84
ASM4YDL088C PCK1P10963 549 aa3.57□□□□□ -1.84
ASM4YDL088C SEC12P11655 471 aa3.57□□□□□ -1.84
ASM4YDL088C PEA2P40091 420 aa3.57□□□□□ -1.84
ASM4YDL088C YDL183CP48569 320 aa3.57□□□□□ -1.84
ASM4YDL088C RSC9Q03124 581 aa3.57□□□□□ -1.84
ASM4YDL088C YGR161W-CQ3E744 92 aa3.57□□□□□ -1.84
ASM4YDL088C BET2P20133 325 aa3.56□□□□□ -1.84
ASM4YDL088C VPS33P20795 691 aa3.56□□□□□ -1.84
ASM4YDL088C JHD1P40034 492 aa3.56□□□□□ -1.84
ASM4YDL088C YIL092WP40497 633 aa3.56□□□□□ -1.84
ASM4YDL088C YGR237CP50089 785 aa3.56□□□□□ -1.84
ASM4YDL088C YNR029CP53729 429 aaKnown RBP3.56□□□□□ -1.84
ASM4YDL088C BSP1Q06604 576 aa3.56□□□□□ -1.84
ASM4YDL088C RDL1Q12305 139 aaKnown RBP3.56□□□□□ -1.84
ASM4YDL088C AEP2P22136 580 aa3.55□□□□□ -1.84
ASM4YDL088C RMA1P36001 430 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C GPP1P41277 250 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C YJR142WP47173 342 aa3.55□□□□□ -1.84
ASM4YDL088C MDR1P53258 950 aa3.55□□□□□ -1.84
ASM4YDL088C YPL071CQ02864 156 aa3.55□□□□□ -1.84
ASM4YDL088C USA1Q03714 838 aa3.55□□□□□ -1.84
ASM4YDL088C ENT2Q05785 613 aa3.55□□□□□ -1.84
ASM4YDL088C NGL1Q08213 363 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C CIR2Q08822 631 aa3.55□□□□□ -1.84
ASM4YDL088C AHA1Q12449 350 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C BI2P03873 423 aa3.55□□□□□ -1.84
ASM4YDL088C YPK1P12688 680 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C GSY2P27472 705 aa3.55□□□□□ -1.84
ASM4YDL088C HXT4P32467 576 aa3.55□□□□□ -1.84
ASM4YDL088C DSS4P32601 143 aa3.55□□□□□ -1.84
ASM4YDL088C ECM32P32644 1121 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C YPT10P38146 199 aa3.55□□□□□ -1.84
ASM4YDL088C MNT3P40549 630 aa3.55□□□□□ -1.84
ASM4YDL088C IDP3P53982 420 aaKnown RBP3.55□□□□□ -1.84
ASM4YDL088C BST1P43571 1029 aa3.54□□□□□ -1.84
ASM4YDL088C GPG1P53130 126 aa3.54□□□□□ -1.84
ASM4YDL088C YPL068CQ02749 293 aa3.54□□□□□ -1.84
ASM4YDL088C TPO3Q06451 622 aa3.54□□□□□ -1.84
ASM4YDL088C YPR027CQ12079 277 aa3.54□□□□□ -1.84
ASM4YDL088C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
ASM4YDL088C AAC1P04710 309 aa3.53□□□□□ -1.84
ASM4YDL088C YUR1P26725 428 aa3.53□□□□□ -1.84
ASM4YDL088C SPC97P38863 823 aa3.53□□□□□ -1.84
ASM4YDL088C STB2P46679 850 aa3.53□□□□□ -1.84
ASM4YDL088C SCW4P53334 386 aaKnown RBP3.53□□□□□ -1.84
ASM4YDL088C PCL8Q08966 492 aa3.53□□□□□ -1.84
ASM4YDL088C CRC1Q12289 327 aa3.53□□□□□ -1.84
ASM4YDL088C YAP1P19880 650 aaKnown RBP3.52□□□□□ -1.85
ASM4YDL088C TDA10P42938 290 aa3.52□□□□□ -1.85
ASM4YDL088C PEF1P53238 335 aa3.52□□□□□ -1.85
ASM4YDL088C TDA9Q04545 1251 aa3.52□□□□□ -1.85
ASM4YDL088C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
ASM4YDL088C YEL076C-AP0CX16 216 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms