RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	YOR378W	Q08902	515 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	YNL162W-A	Q3E7A8	72 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	PCK1	P10963	549 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	HOM2	P13663	365 aa	Known RBP	4.58	□□□□□ -1.68
ATP16	YDL004W	CNE1	P27825	502 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	TFC4	P33339	1025 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	YGL117W	P53133	265 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	SLD3	P53135	668 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	BUD17	P53727	317 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	ARG7	Q04728	441 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	COQ11	Q05892	277 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	MRI1	Q06489	411 aa	Known RBP	4.58	□□□□□ -1.68
ATP16	YDL004W	ARR3	Q06598	404 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	OSW1	Q08692	278 aa		4.58	□□□□□ -1.68
ATP16	YDL004W	MDM10	P18409	493 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	AAD3	P25612	363 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	HEM12	P32347	362 aa	Predicted RBP	4.57	□□□□□ -1.68
ATP16	YDL004W	ENP1	P38333	483 aa	Known RBP	4.57	□□□□□ -1.68
ATP16	YDL004W	PEF1	P53238	335 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	MDR1	P53258	950 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	CPR8	P53728	308 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	ZPS1	Q12512	249 aa		4.57	□□□□□ -1.68
ATP16	YDL004W	ERG11	P10614	530 aa		4.56	□□□□□ -1.68
ATP16	YDL004W	ORC2	P32833	620 aa		4.56	□□□□□ -1.68
ATP16	YDL004W	YJL193W	P39542	402 aa		4.56	□□□□□ -1.68
ATP16	YDL004W	TAX4	P47030	604 aa		4.56	□□□□□ -1.68
ATP16	YDL004W	FOL1	P53848	824 aa		4.56	□□□□□ -1.68
ATP16	YDL004W	KAR1	P11927	433 aa		4.55	□□□□□ -1.68
ATP16	YDL004W	HOP1	P20050	605 aa		4.55	□□□□□ -1.68
ATP16	YDL004W	VPS33	P20795	691 aa		4.55	□□□□□ -1.68
ATP16	YDL004W	CAP1	P28495	268 aa	Known RBP	4.55	□□□□□ -1.68
ATP16	YDL004W	MTD1	Q02046	320 aa	Known RBP	4.55	□□□□□ -1.68
ATP16	YDL004W	YDL073W	Q07454	984 aa		4.55	□□□□□ -1.68
ATP16	YDL004W	VPS5	Q92331	675 aa		4.55	□□□□□ -1.68
ATP16	YDL004W	TUF1	P02992	437 aa	Known RBP	4.54	□□□□□ -1.68
ATP16	YDL004W	CPA2	P03965	1118 aa	Known RBP	4.54	□□□□□ -1.68
ATP16	YDL004W	PLC1	P32383	869 aa		4.54	□□□□□ -1.68
ATP16	YDL004W	PEX14	P53112	341 aa		4.54	□□□□□ -1.68
ATP16	YDL004W	COQ6	P53318	479 aa		4.54	□□□□□ -1.68
ATP16	YDL004W	HOL1	P53389	586 aa		4.54	□□□□□ -1.68
ATP16	YDL004W	RPS15	Q01855	142 aa	Known RBP	4.54	□□□□□ -1.68
ATP16	YDL004W	PEX15	Q08215	383 aa		4.54	□□□□□ -1.68
ATP16	YDL004W	SSB1	P11484	613 aa	Known RBP	4.53	□□□□□ -1.68
ATP16	YDL004W	SEC12	P11655	471 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	NUP1	P20676	1076 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	ARG1	P22768	420 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	CWH43	P25618	953 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	DSS4	P32601	143 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	EMP65	P40085	556 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	SSB2	P40150	613 aa	Known RBP	4.53	□□□□□ -1.68
ATP16	YDL004W	MNT2	P53059	558 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	YNL018C	P53976	612 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	HOF1	Q05080	669 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	PHM6	Q05637	104 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	TGS1	Q12052	315 aa		4.53	□□□□□ -1.68
ATP16	YDL004W	RTK1	Q12100	620 aa	Predicted RBP	4.53	□□□□□ -1.68
ATP16	YDL004W	URA3	P03962	267 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	LEU2	P04173	364 aa	Predicted RBP	4.52	□□□□□ -1.69
ATP16	YDL004W	WHI2	P12611	486 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	PMA2	P19657	947 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	LOT5	P34234	306 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	CCL1	P37366	393 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	PAF1	P38351	445 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	AI5_ALPHA	Q9ZZX1	630 aa		4.52	□□□□□ -1.69
ATP16	YDL004W	RPL7A	P05737	244 aa	Known RBP	4.51	□□□□□ -1.69
ATP16	YDL004W	BET2	P20133	325 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	RNR3	P21672	869 aa	Known RBP	4.51	□□□□□ -1.69
ATP16	YDL004W	STL1	P39932	569 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	YIL092W	P40497	633 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	PIP2	P52960	996 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	SAP4	P53036	818 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	RIM13	Q03792	727 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	RPL7B	Q12213	244 aa	Known RBP	4.51	□□□□□ -1.69
ATP16	YDL004W	HOS1	Q12214	470 aa		4.51	□□□□□ -1.69
ATP16	YDL004W	SEC3	P33332	1336 aa	Known RBP	4.5	□□□□□ -1.69
ATP16	YDL004W	HEM1	P09950	548 aa	Predicted RBP	4.5	□□□□□ -1.69
ATP16	YDL004W	YPK1	P12688	680 aa	Known RBP	4.5	□□□□□ -1.69
ATP16	YDL004W	MRC1	P25588	1096 aa		4.5	□□□□□ -1.69
ATP16	YDL004W	HOT13	P36078	116 aa		4.5	□□□□□ -1.69
ATP16	YDL004W	YPT10	P38146	199 aa		4.5	□□□□□ -1.69
ATP16	YDL004W	MAD2	P40958	196 aa		4.5	□□□□□ -1.69
ATP16	YDL004W	USA1	Q03714	838 aa		4.5	□□□□□ -1.69
ATP16	YDL004W	MRPL9	P31334	269 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	PET309	P32522	965 aa	Predicted RBP	4.49	□□□□□ -1.69
ATP16	YDL004W	STB5	P38699	743 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	YFL015C	P43578	164 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	YJL043W	P47053	257 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	YNR071C	P53757	342 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
ATP16	YDL004W	DIN7	Q12086	430 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	SLX4	Q12098	748 aa		4.49	□□□□□ -1.69
ATP16	YDL004W	AQY1	P0CD91	305 aa		4.48	□□□□□ -1.69
ATP16	YDL004W	ATG36	P46983	293 aa		4.48	□□□□□ -1.69
ATP16	YDL004W	SEG1	Q04279	960 aa		4.48	□□□□□ -1.69
ATP16	YDL004W	GFD1	Q04839	188 aa	Known RBP	4.48	□□□□□ -1.69
ATP16	YDL004W	NUR1	Q12066	484 aa		4.48	□□□□□ -1.69
ATP16	YDL004W	PGK1	P00560	416 aa	Known RBP	4.47	□□□□□ -1.69
ATP16	YDL004W	APN1	P22936	367 aa		4.47	□□□□□ -1.69
ATP16	YDL004W	WAR1	Q03631	944 aa		4.47	□□□□□ -1.69
ATP16	YDL004W	PSF3	Q12146	194 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms