RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C AGE1Q04412 482 aa5.92□□□□□ -1.46
PDB1YBR221C AIM32Q04689 311 aa5.92□□□□□ -1.46
PDB1YBR221C RSF1Q05043 376 aa5.92□□□□□ -1.46
PDB1YBR221C TSR1Q07381 788 aaKnown RBP5.92□□□□□ -1.46
PDB1YBR221C NOP6Q07623 225 aaKnown RBP5.92□□□□□ -1.46
PDB1YBR221C ALE1Q08548 619 aa5.92□□□□□ -1.46
PDB1YBR221C RTC5Q12108 567 aaKnown RBP5.92□□□□□ -1.46
PDB1YBR221C VPS13Q07878 3144 aa5.92□□□□□ -1.46
PDB1YBR221C YPR117WQ06116 2489 aa5.91□□□□□ -1.46
PDB1YBR221C TAO3P40468 2376 aa5.91□□□□□ -1.46
PDB1YBR221C YLR358CO13565 187 aa5.91□□□□□ -1.46
PDB1YBR221C KSS1P14681 368 aa5.91□□□□□ -1.46
PDB1YBR221C UBC1P21734 215 aaKnown RBP5.91□□□□□ -1.46
PDB1YBR221C MSN1P22148 382 aa5.91□□□□□ -1.46
PDB1YBR221C YCK2P23292 546 aaKnown RBP5.91□□□□□ -1.46
PDB1YBR221C VAC17P25591 423 aa5.91□□□□□ -1.46
PDB1YBR221C ADK2P26364 225 aa5.91□□□□□ -1.46
PDB1YBR221C NUD1P32336 851 aa5.91□□□□□ -1.46
PDB1YBR221C HOG1P32485 435 aa5.91□□□□□ -1.46
PDB1YBR221C UTR2P32623 467 aa5.91□□□□□ -1.46
PDB1YBR221C SFA1P32771 386 aa5.91□□□□□ -1.46
PDB1YBR221C SUR1P33300 382 aa5.91□□□□□ -1.46
PDB1YBR221C AFR1P33304 620 aa5.91□□□□□ -1.46
PDB1YBR221C PCH2P38126 564 aa5.91□□□□□ -1.46
PDB1YBR221C APM3P38153 483 aa5.91□□□□□ -1.46
PDB1YBR221C TDA3P38758 523 aa5.91□□□□□ -1.46
PDB1YBR221C UME6P39001 836 aa5.91□□□□□ -1.46
PDB1YBR221C DUN1P39009 513 aa5.91□□□□□ -1.46
PDB1YBR221C RRT6P53117 311 aaPredicted RBP5.91□□□□□ -1.46
PDB1YBR221C MDR1P53258 950 aa5.91□□□□□ -1.46
PDB1YBR221C SNF12P53628 566 aa5.91□□□□□ -1.46
PDB1YBR221C TOF1P53840 1238 aa5.91□□□□□ -1.46
PDB1YBR221C RPT6Q01939 405 aaKnown RBP5.91□□□□□ -1.46
PDB1YBR221C TOF2Q02208 771 aa5.91□□□□□ -1.46
PDB1YBR221C HOS3Q02959 697 aaKnown RBP5.91□□□□□ -1.46
PDB1YBR221C INP2Q03824 705 aa5.91□□□□□ -1.46
PDB1YBR221C RRB1Q04225 511 aaKnown RBP5.91□□□□□ -1.46
PDB1YBR221C YPR071WQ12346 211 aa5.91□□□□□ -1.46
PDB1YBR221C CSR2Q12734 1121 aa5.91□□□□□ -1.46
PDB1YBR221C YOR019WQ99248 730 aa5.91□□□□□ -1.46
PDB1YBR221C HMG1P12683 1054 aa5.9□□□□□ -1.46
PDB1YBR221C VPS3P23643 1011 aa5.9□□□□□ -1.46
PDB1YBR221C DMC1P25453 334 aa5.9□□□□□ -1.46
PDB1YBR221C AAR2P32357 355 aaPredicted RBP5.9□□□□□ -1.46
PDB1YBR221C KRE6P32486 720 aa5.9□□□□□ -1.46
PDB1YBR221C SLA1P32790 1244 aa5.9□□□□□ -1.46
PDB1YBR221C APE3P37302 537 aaKnown RBP5.9□□□□□ -1.46
PDB1YBR221C PEX32P38292 413 aa5.9□□□□□ -1.46
PDB1YBR221C PKP1P40530 394 aa5.9□□□□□ -1.46
PDB1YBR221C NAS2P40555 220 aa5.9□□□□□ -1.46
PDB1YBR221C INA22P40576 216 aa5.9□□□□□ -1.46
PDB1YBR221C LYS14P40971 790 aa5.9□□□□□ -1.46
PDB1YBR221C LIA1P47120 325 aaKnown RBP5.9□□□□□ -1.46
PDB1YBR221C GCV2P49095 1034 aa5.9□□□□□ -1.46
PDB1YBR221C HFM1P51979 1187 aa5.9□□□□□ -1.46
PDB1YBR221C TEL2P53038 688 aa5.9□□□□□ -1.46
PDB1YBR221C SGF73P53165 657 aa5.9□□□□□ -1.46
PDB1YBR221C TIF35Q04067 274 aaKnown RBP5.9□□□□□ -1.46
PDB1YBR221C CRF1Q04930 467 aa5.9□□□□□ -1.46
PDB1YBR221C SPH1Q06160 661 aa5.9□□□□□ -1.46
PDB1YBR221C YDR306CQ06640 478 aa5.9□□□□□ -1.46
PDB1YBR221C NBA1Q08229 501 aaKnown RBP5.9□□□□□ -1.46
PDB1YBR221C GUP2Q08929 609 aa5.9□□□□□ -1.46
PDB1YBR221C NUR1Q12066 484 aa5.9□□□□□ -1.46
PDB1YBR221C DCS2Q12123 353 aa5.9□□□□□ -1.46
PDB1YBR221C HAL9Q12180 1030 aa5.9□□□□□ -1.46
PDB1YBR221C PCD1Q12524 340 aa5.9□□□□□ -1.46
PDB1YBR221C HTA1P04911 132 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C HTA2P04912 132 aa5.89□□□□□ -1.47
PDB1YBR221C PDC1P06169 563 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C HPR1P17629 752 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C DBP3P20447 523 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C DBP2P24783 546 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C ASF2P32448 525 aaPredicted RBP5.89□□□□□ -1.47
PDB1YBR221C SAC6P32599 642 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C YEL043WP32618 956 aa5.89□□□□□ -1.47
PDB1YBR221C SDS22P36047 338 aa5.89□□□□□ -1.47
PDB1YBR221C SLX1P38324 304 aa5.89□□□□□ -1.47
PDB1YBR221C TIF11P38912 153 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C YEL025CP39991 1188 aa5.89□□□□□ -1.47
PDB1YBR221C MET12P46151 657 aa5.89□□□□□ -1.47
PDB1YBR221C YJR039WP47107 1121 aa5.89□□□□□ -1.47
PDB1YBR221C PRO2P54885 456 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C ROD1Q02805 837 aa5.89□□□□□ -1.47
PDB1YBR221C PML39Q03760 334 aa5.89□□□□□ -1.47
PDB1YBR221C YAP6Q03935 383 aa5.89□□□□□ -1.47
PDB1YBR221C YHM2Q04013 314 aa5.89□□□□□ -1.47
PDB1YBR221C VBA4Q04602 768 aaKnown RBP5.89□□□□□ -1.47
PDB1YBR221C YDR338CQ05497 695 aa5.89□□□□□ -1.47
PDB1YBR221C YOR352WQ08816 343 aa5.89□□□□□ -1.47
PDB1YBR221C TRM8Q12009 286 aa5.89□□□□□ -1.47
PDB1YBR221C TGL5Q12043 749 aa5.89□□□□□ -1.47
PDB1YBR221C YPL066WQ12194 479 aa5.89□□□□□ -1.47
PDB1YBR221C CDC19P00549 500 aaKnown RBP5.88□□□□□ -1.47
PDB1YBR221C ADE8P04161 214 aa5.88□□□□□ -1.47
PDB1YBR221C SWI6P09959 803 aa5.88□□□□□ -1.47
PDB1YBR221C RPS21AP0C0V8 87 aaKnown RBP5.88□□□□□ -1.47
PDB1YBR221C NCP1P16603 691 aaKnown RBP5.88□□□□□ -1.47
PDB1YBR221C RAM1P22007 431 aa5.88□□□□□ -1.47
PDB1YBR221C NPP1P25353 742 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms