RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SGIP1Q9BQI5 828 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 INCENPQ9NQS7 918 aa20.87■□□□□ 0.93
PHGDH-232ENST00000641947 NEDD4P46934 1319 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 DDX60LQ5H9U9 1706 aaKnown RBP20.86■□□□□ 0.93
PHGDH-232ENST00000641947 HMGB1P09429 215 aaKnown RBP20.86■□□□□ 0.93
PHGDH-232ENST00000641947 ANTXR2P58335 489 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 CTDSPL2Q05D32 466 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 TTLL6Q8N841 843 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 EYA3Q99504 573 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 MXD3Q9BW11 206 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 DBNDD1Q9H9R9 158 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
PHGDH-232ENST00000641947 DTNBO60941 627 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 TDO2P48775 406 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 TMED8Q6PL24 325 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-232ENST00000641947 INTS4Q96HW7 963 aaKnown RBP20.85■□□□□ 0.93
PHGDH-232ENST00000641947 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-232ENST00000641947 COL4A5P29400 1685 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 MROH7-TTC4A0A0A0MT08 1334 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 PKP1Q13835 747 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 NECAB1Q8N987 351 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 AGXT2Q9BYV1 514 aa20.85■□□□□ 0.93
PHGDH-232ENST00000641947 GPHNQ9NQX3 736 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-232ENST00000641947 EVX2Q03828 476 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 TBC1D22AQ8WUA7 517 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 BRF1Q92994 677 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 NACAP1Q9BZK3 213 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 FER1L6Q2WGJ9 1857 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 ECM29Q5VYK3 1845 aa20.84■□□□□ 0.93
PHGDH-232ENST00000641947 IGSF3O75054 1194 aa20.83■□□□□ 0.93
PHGDH-232ENST00000641947 ANKRD1Q15327 319 aa20.83■□□□□ 0.93
PHGDH-232ENST00000641947 AOC3Q16853 763 aa20.83■□□□□ 0.93
PHGDH-232ENST00000641947 NCOA7Q8NI08 942 aa20.83■□□□□ 0.93
PHGDH-232ENST00000641947 FBXW7Q969H0 707 aa20.83■□□□□ 0.93
PHGDH-232ENST00000641947 ZSCAN31Q96LW9 406 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-232ENST00000641947 MYH1P12882 1939 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 CYP2D7A0A087X1C5 515 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 POLD1P28340 1107 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 CYB5R4Q7L1T6 521 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 SH3RF3Q8TEJ3 882 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-232ENST00000641947 SH2B1Q9NRF2 756 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-232ENST00000641947 GSTO1P78417 241 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 RAB3GAP1Q15042 981 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 NFKBIBQ15653 356 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
PHGDH-232ENST00000641947 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
PHGDH-232ENST00000641947 DCP1AQ9NPI6 582 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-232ENST00000641947 B4E1Z4 1266 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 PRC1O43663 620 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 ECE2O60344 883 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 PPARAQ07869 468 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 NBR1Q14596 966 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 CRNKL1Q9BZJ0 848 aaKnown RBP20.81■□□□□ 0.92
PHGDH-232ENST00000641947 GAKO14976 1311 aa20.81■□□□□ 0.92
PHGDH-232ENST00000641947 PTGER2P43116 358 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 PPP4CP60510 307 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 APOBRQ0VD83 1088 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 KIAA2012Q0VF49 1180 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 AKNAD1Q5T1N1 836 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 CTR9Q6PD62 1173 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 PODNQ7Z5L7 613 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 STK11IPQ8N1F8 1099 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 STAG1Q8WVM7 1258 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 MINDY4BA8MYZ0 360 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 MCM5P33992 734 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 BTDP43251 543 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 TGFB2P61812 414 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 STK3Q13188 491 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 GIMAP6Q6P9H5 292 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 RALYLQ86SE5 291 aaKnown RBP20.8■□□□□ 0.92
PHGDH-232ENST00000641947 FBXL16Q8N461 479 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 MKRN1Q9UHC7 482 aaKnown RBP20.8■□□□□ 0.92
PHGDH-232ENST00000641947 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 ZDHHC9Q9Y397 364 aa20.8■□□□□ 0.92
PHGDH-232ENST00000641947 GPR75-ASB3A0A0A6YYF3 556 aa20.79■□□□□ 0.92
PHGDH-232ENST00000641947 TNPO1Q92973 898 aaKnown RBP20.79■□□□□ 0.92
PHGDH-232ENST00000641947 FAM163AQ96GL9 167 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-232ENST00000641947 F8W031 263 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-232ENST00000641947 G3V3G9 751 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 LDHCP07864 332 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 CYP2D6P10635 497 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 DCAF8Q5TAQ9 597 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 ATP8A2Q9NTI2 1148 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 DAGLAQ9Y4D2 1042 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
PHGDH-232ENST00000641947 UTRNP46939 3433 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 YDJCA8MPS7 323 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 USP17L21D6R901 530 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 RHBDL3P58872 404 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 GTF3C6Q969F1 213 aa20.77■□□□□ 0.92
PHGDH-232ENST00000641947 PPIP5K2O43314 1243 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 FGD1P98174 961 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 TRDNQ13061 729 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 DACT2Q5SW24 774 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 PSMD1Q99460 953 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 SENP2Q9HC62 589 aa20.77■□□□□ 0.91
PHGDH-232ENST00000641947 PIM2Q9P1W9 311 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms