RNA–Protein interactions for RNA: ENST00000641674.1

CASC19-248, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-248ENST00000641674 UBL7Q96S82 380 aaPredicted RBP8.17□□□□□ -1.1
CASC19-248ENST00000641674 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
CASC19-248ENST00000641674 RAXQ9Y2V3 346 aa8.17□□□□□ -1.1
CASC19-248ENST00000641674 PRAG1Q86YV5 1406 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 FOXO3O43524 673 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 Q6ZS46 218 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
CASC19-248ENST00000641674 DHX57Q6P158 1386 aaKnown RBP8.16□□□□□ -1.1
CASC19-248ENST00000641674 ABCC11Q96J66 1382 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 IFT172Q9UG01 1749 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 SPATA31E1Q6ZUB1 1445 aa8.16□□□□□ -1.1
CASC19-248ENST00000641674 CDK12Q9NYV4 1490 aaPredicted RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 LOC102724428A0A0B4J2F2 783 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 OPLAHO14841 1288 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 RAD21O60216 631 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 PTCD1O75127 700 aaKnown RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 YBX3P16989 372 aaKnown RBP eCLIP8.15□□□□□ -1.1
CASC19-248ENST00000641674 IGFBP4P22692 258 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 SIK1P57059 783 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 C14orf93Q9H972 538 aaKnown RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 TRPC5Q9UL62 973 aaPredicted RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
CASC19-248ENST00000641674 LAMC1P11047 1609 aa8.15□□□□□ -1.1
CASC19-248ENST00000641674 DPYDQ12882 1025 aa8.14□□□□□ -1.11
CASC19-248ENST00000641674 POGKQ9P215 609 aa8.14□□□□□ -1.11
CASC19-248ENST00000641674 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
CASC19-248ENST00000641674 STOML1Q9UBI4 398 aa8.14□□□□□ -1.11
CASC19-248ENST00000641674 TRIM33Q9UPN9 1127 aa8.14□□□□□ -1.11
CASC19-248ENST00000641674 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
CASC19-248ENST00000641674 CENPBP07199 599 aaPredicted RBP8.13□□□□□ -1.11
CASC19-248ENST00000641674 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 TECPR2O15040 1411 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 PIK3C2GO75747 1445 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 YTHDC2Q9H6S0 1430 aaKnown RBP8.13□□□□□ -1.11
CASC19-248ENST00000641674 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
CASC19-248ENST00000641674 MMP20O60882 483 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 XYLBO75191 536 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 WISP1O95388 367 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 ARID4AP29374 1257 aaPredicted RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 XPCQ01831 940 aaPredicted RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 KRT28Q7Z3Y7 464 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 ZDHHC13Q8IUH4 622 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 RGL4Q8IZJ4 473 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 CMTR1Q8N1G2 835 aaKnown RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 ARMC10Q8N2F6 343 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 GALNT11Q8NCW6 608 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 C11orf16Q9NQ32 467 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
CASC19-248ENST00000641674 RAB3GAP2Q9H2M9 1393 aa8.12□□□□□ -1.11
CASC19-248ENST00000641674 GHRHP01286 108 aa8.11□□□□□ -1.11
CASC19-248ENST00000641674 ZEB1P37275 1124 aaPredicted RBP8.11□□□□□ -1.11
CASC19-248ENST00000641674 PTK7Q13308 1070 aa8.11□□□□□ -1.11
CASC19-248ENST00000641674 SAFB2Q14151 953 aaKnown RBP eCLIP8.11□□□□□ -1.11
CASC19-248ENST00000641674 C11orf91Q3C1V1 193 aa8.11□□□□□ -1.11
CASC19-248ENST00000641674 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
CASC19-248ENST00000641674 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
CASC19-248ENST00000641674 RGPD8O14715 1765 aaPredicted RBP8.11□□□□□ -1.11
CASC19-248ENST00000641674 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
CASC19-248ENST00000641674 COL22A1Q8NFW1 1626 aaPredicted RBP8.1□□□□□ -1.11
CASC19-248ENST00000641674 EGFRP00533 1210 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 PSAPP07602 524 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 LCE1DQ5T752 114 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 PRAM1Q96QH2 718 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 LRFN2Q9ULH4 789 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 FMN2Q9NZ56 1722 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 PLEKHH1Q9ULM0 1364 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 MYOM2P54296 1465 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 PXDNQ92626 1479 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 GSC2O15499 205 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 SPINK2P20155 84 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 KRTAP4-7Q9BYR0 210 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
CASC19-248ENST00000641674 KCNK4Q9NYG8 393 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
CASC19-248ENST00000641674 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
CASC19-248ENST00000641674 LINC01387J3KSC0 135 aa8.09□□□□□ -1.12
CASC19-248ENST00000641674 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.12
CASC19-248ENST00000641674 TREML1Q86YW5 311 aa8.09□□□□□ -1.12
CASC19-248ENST00000641674 NRXN1Q9ULB1 1477 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 ARID1BQ8NFD5 2236 aaPredicted RBP8.08□□□□□ -1.12
CASC19-248ENST00000641674 HMX2A2RU54 273 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 NFIAQ12857 509 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 UNC5CLQ8IV45 518 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 MYO19Q96H55 970 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 C7orf69Q9H7B7 122 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 PPME1Q9Y570 386 aa8.08□□□□□ -1.12
CASC19-248ENST00000641674 EIF3AQ14152 1382 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms