RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TNS1Q9HBL0 1735 aaKnown RBP20.32■□□□□ 0.84
PHGDH-208ENST00000641023 NEDD4P46934 1319 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 PPEF1O14829 653 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-208ENST00000641023 SRGNP10124 158 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 NPR1P16066 1061 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 DZIP1Q86YF9 867 aaKnown RBP20.32■□□□□ 0.84
PHGDH-208ENST00000641023 NSUN7Q8NE18 718 aaKnown RBP20.32■□□□□ 0.84
PHGDH-208ENST00000641023 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
PHGDH-208ENST00000641023 GPHNQ9NQX3 736 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-208ENST00000641023 DYNLL1P63167 89 aaKnown RBP20.31■□□□□ 0.84
PHGDH-208ENST00000641023 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
PHGDH-208ENST00000641023 NCLP19338 710 aaKnown RBP20.31■□□□□ 0.84
PHGDH-208ENST00000641023 PPARAQ07869 468 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 DDX11Q96FC9 970 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 CD209Q9NNX6 404 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 JAG2Q9Y219 1238 aa20.31■□□□□ 0.84
PHGDH-208ENST00000641023 NCOA5Q9HCD5 579 aaKnown RBP20.3■□□□□ 0.84
PHGDH-208ENST00000641023 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 NRXN2Q9P2S2 1712 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 GOLGA8BA8MQT2 603 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 SH2B2O14492 632 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-208ENST00000641023 CTDNEP1O95476 244 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 MBD3O95983 291 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 CDC37L1Q7L3B6 337 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 GPR101Q96P66 508 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-208ENST00000641023 CRNKL1Q9BZJ0 848 aaKnown RBP20.3■□□□□ 0.84
PHGDH-208ENST00000641023 AATFQ9NY61 560 aaKnown RBP eCLIP20.3■□□□□ 0.84
PHGDH-208ENST00000641023 ZSWIM5Q9P217 1185 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 ANAPC4Q9UJX5 808 aa20.3■□□□□ 0.84
PHGDH-208ENST00000641023 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 H3BQV1 296 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 KDM4AO75164 1064 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 IL1R1P14778 569 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 SLC15A2Q16348 729 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 CSPP1Q1MSJ5 1256 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-208ENST00000641023 TOMM22Q9NS69 142 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 POLLQ9UGP5 575 aa20.29■□□□□ 0.84
PHGDH-208ENST00000641023 C6orf229H3BNL8 230 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 GSTO1P78417 241 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 EN1Q05925 392 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-208ENST00000641023 EZH2Q15910 746 aaKnown RBP20.28■□□□□ 0.84
PHGDH-208ENST00000641023 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 CAMKK2Q96RR4 588 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 INCENPQ9NQS7 918 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 SART3Q15020 963 aaKnown RBP20.28■□□□□ 0.84
PHGDH-208ENST00000641023 MSL1Q68DK7 614 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 MTA3Q9BTC8 594 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 ATP8A2Q9NTI2 1148 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
PHGDH-208ENST00000641023 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 CPLX1O14810 134 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 LIFRP42702 1097 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 RRP12Q5JTH9 1297 aaKnown RBP20.27■□□□□ 0.84
PHGDH-208ENST00000641023 SGMS1Q86VZ5 419 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 GPT2Q8TD30 523 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.84
PHGDH-208ENST00000641023 IFIT3O14879 490 aaKnown RBP20.26■□□□□ 0.83
PHGDH-208ENST00000641023 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 FERMT3Q86UX7 667 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 ERICH2A1L162 156 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 GOLGA6L3A6NEY3 463 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 LDHCP07864 332 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 PCP11498 1178 aaKnown RBP20.26■□□□□ 0.83
PHGDH-208ENST00000641023 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
PHGDH-208ENST00000641023 NFXL1Q6ZNB6 911 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 NKX2-3Q8TAU0 364 aa20.26■□□□□ 0.83
PHGDH-208ENST00000641023 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
PHGDH-208ENST00000641023 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 BAG3O95817 575 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 CAVIN1Q6NZI2 390 aaKnown RBP20.25■□□□□ 0.83
PHGDH-208ENST00000641023 ESR2Q92731 530 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 ZSCAN16Q9H4T2 348 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-208ENST00000641023 LY9Q9HBG7 655 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 METAP2P50579 478 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■■□□□ 12.1
PHGDH-208ENST00000641023 KRT85P78386 507 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 APOA5Q6Q788 366 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 TMTC2Q8N394 836 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 MPNDQ8N594 471 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 TBC1D22AQ8WUA7 517 aa20.25■□□□□ 0.83
PHGDH-208ENST00000641023 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-208ENST00000641023 DCP1AQ9NPI6 582 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-208ENST00000641023 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms