RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CLRN2A0PK11 232 aa23.46■■□□□ 1.35
HLA-A-209ENST00000638375 RFX7Q2KHR2 1363 aa23.46■■□□□ 1.35
HLA-A-209ENST00000638375 SPDYE2Q495Y8 402 aa23.46■■□□□ 1.35
HLA-A-209ENST00000638375 MIGA1Q8NAN2 632 aa23.46■■□□□ 1.35
HLA-A-209ENST00000638375 AATFQ9NY61 560 aaKnown RBP eCLIP23.46■■□□□ 1.35
HLA-A-209ENST00000638375 PGAP2Q9UHJ9 254 aa23.46■■□□□ 1.35
HLA-A-209ENST00000638375 ZFYP08048 801 aaPredicted RBP23.45■■□□□ 1.34
HLA-A-209ENST00000638375 RHBDL3P58872 404 aa23.45■■□□□ 1.34
HLA-A-209ENST00000638375 DYNLL1P63167 89 aaKnown RBP23.45■■□□□ 1.34
HLA-A-209ENST00000638375 BMP2KLQ5H9B9 411 aa23.45■■□□□ 1.34
HLA-A-209ENST00000638375 ANGEL2Q5VTE6 544 aaKnown RBP23.45■■□□□ 1.34
HLA-A-209ENST00000638375 CDC42EP5Q6NZY7 148 aa23.45■■□□□ 1.34
HLA-A-209ENST00000638375 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
HLA-A-209ENST00000638375 ZC3H15Q8WU90 426 aaKnown RBP23.45■■□□□ 1.34
HLA-A-209ENST00000638375 GGA3Q9NZ52 723 aa23.45■■□□□ 1.34
HLA-A-209ENST00000638375 ZNF70Q9UC06 446 aaPredicted RBP23.45■■□□□ 1.34
HLA-A-209ENST00000638375 PPP4CP60510 307 aa23.44■■□□□ 1.34
HLA-A-209ENST00000638375 LRRFIP1Q32MZ4 808 aaKnown RBP23.44■■□□□ 1.34
HLA-A-209ENST00000638375 RIOK1Q9BRS2 568 aaKnown RBP23.44■■□□□ 1.34
HLA-A-209ENST00000638375 USP40Q9NVE5 1235 aa23.44■■□□□ 1.34
HLA-A-209ENST00000638375 MYO1BO43795 1136 aa23.43■■□□□ 1.34
HLA-A-209ENST00000638375 ZMYM1Q5SVZ6 1142 aa23.43■■□□□ 1.34
HLA-A-209ENST00000638375 APPBP2Q92624 585 aa23.43■■□□□ 1.34
HLA-A-209ENST00000638375 OSBP2Q969R2 916 aa23.43■■□□□ 1.34
HLA-A-209ENST00000638375 PUS7LQ9H0K6 701 aaKnown RBP23.43■■□□□ 1.34
HLA-A-209ENST00000638375 CLEC11AQ9Y240 323 aa23.43■■□□□ 1.34
HLA-A-209ENST00000638375 BAG3O95817 575 aa23.42■■□□□ 1.34
HLA-A-209ENST00000638375 CACNB3P54284 484 aa23.42■■□□□ 1.34
HLA-A-209ENST00000638375 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
HLA-A-209ENST00000638375 SH3RF3Q8TEJ3 882 aaPredicted RBP23.42■■□□□ 1.34
HLA-A-209ENST00000638375 NOL10Q9BSC4 688 aaKnown RBP23.42■■□□□ 1.34
HLA-A-209ENST00000638375 VEZTQ9HBM0 779 aa23.42■■□□□ 1.34
HLA-A-209ENST00000638375 SCAF8Q9UPN6 1271 aaKnown RBP23.42■■□□□ 1.34
HLA-A-209ENST00000638375 ECM29Q5VYK3 1845 aa23.42■■□□□ 1.34
HLA-A-209ENST00000638375 PITPNM2Q9BZ72 1349 aa23.41■■□□□ 1.34
HLA-A-209ENST00000638375 MAGEB6P1A0A0J9YX57 407 aa23.41■■□□□ 1.34
HLA-A-209ENST00000638375 LCORLQ8N3X6 602 aa23.41■■□□□ 1.34
HLA-A-209ENST00000638375 SEC62Q99442 399 aaKnown RBP23.41■■□□□ 1.34
HLA-A-209ENST00000638375 AK9Q5TCS8 1911 aa23.41■■□□□ 1.34
HLA-A-209ENST00000638375 M0R2C6 588 aa23.4■■□□□ 1.34
HLA-A-209ENST00000638375 WDHD1O75717 1129 aaPredicted RBP23.4■■□□□ 1.34
HLA-A-209ENST00000638375 MBD4O95243 580 aa23.4■■□□□ 1.34
HLA-A-209ENST00000638375 NFIAQ12857 509 aa23.4■■□□□ 1.34
HLA-A-209ENST00000638375 NMIQ13287 307 aaPredicted RBP23.4■■□□□ 1.34
HLA-A-209ENST00000638375 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
HLA-A-209ENST00000638375 DCPSQ96C86 337 aaKnown RBP23.4■■□□□ 1.34
HLA-A-209ENST00000638375 FAM227BQ96M60 508 aa23.4■■□□□ 1.34
HLA-A-209ENST00000638375 ARMT1Q9H993 441 aa23.4■■□□□ 1.34
HLA-A-209ENST00000638375 A0A0D9SFI3 127 aa23.39■■□□□ 1.33
HLA-A-209ENST00000638375 CHADLQ6NUI6 762 aa23.39■■□□□ 1.33
HLA-A-209ENST00000638375 TMOD2Q9NZR1 351 aa23.39■■□□□ 1.33
HLA-A-209ENST00000638375 TCP10L2B9ZVM9 353 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 PLCG2P16885 1265 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 CERS3Q8IU89 383 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 APOBEC3FQ8IUX4 373 aaKnown RBP23.38■■□□□ 1.33
HLA-A-209ENST00000638375 TEX11Q8IYF3 940 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 IDI2Q9BXS1 227 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 GLIS2Q9BZE0 524 aaPredicted RBP23.38■■□□□ 1.33
HLA-A-209ENST00000638375 DDX4Q9NQI0 724 aaKnown RBP23.38■■□□□ 1.33
HLA-A-209ENST00000638375 CNTNAP1P78357 1384 aa23.38■■□□□ 1.33
HLA-A-209ENST00000638375 ADM5C9JUS6 153 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 TOMM70O94826 608 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 CHMLP26374 656 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 FKBP1CQ5VVH2 108 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 DLK2Q6UY11 383 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 KRT26Q7Z3Y9 468 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 HELLSQ9NRZ9 838 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 DIAPH3Q9NSV4 1193 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 FAM198AQ9UFP1 575 aa23.37■■□□□ 1.33
HLA-A-209ENST00000638375 HIP1O00291 1037 aa23.36■■□□□ 1.33
HLA-A-209ENST00000638375 GPAA1O43292 621 aa23.36■■□□□ 1.33
HLA-A-209ENST00000638375 CCDC129Q6ZRS4 1044 aa23.36■■□□□ 1.33
HLA-A-209ENST00000638375 USP48Q86UV5 1035 aa23.36■■□□□ 1.33
HLA-A-209ENST00000638375 SULF1Q8IWU6 871 aa23.36■■□□□ 1.33
HLA-A-209ENST00000638375 RBM46Q8TBY0 533 aaKnown RBP23.36■■□□□ 1.33
HLA-A-209ENST00000638375 STRBPQ96SI9 672 aaKnown RBP23.36■■□□□ 1.33
HLA-A-209ENST00000638375 PRKAB2O43741 272 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 PICALMQ13492 652 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 TNFAIP1Q13829 316 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 RASA3Q14644 834 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 CWC27Q6UX04 472 aaKnown RBP23.35■■□□□ 1.33
HLA-A-209ENST00000638375 CDC37L1Q7L3B6 337 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 TGFBRAP1Q8WUH2 860 aa23.35■■□□□ 1.33
HLA-A-209ENST00000638375 POLR2AP24928 1970 aaKnown RBP23.34■■□□□ 1.33
HLA-A-209ENST00000638375 TCP10Q12799 353 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 MCMDC2Q4G0Z9 681 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 ZNF589Q86UQ0 364 aaPredicted RBP23.34■■□□□ 1.33
HLA-A-209ENST00000638375 FAM83AQ86UY5 434 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 ZFPM1Q8IX07 1006 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 SMC1BQ8NDV3 1235 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 CRNKL1Q9BZJ0 848 aaKnown RBP23.34■■□□□ 1.33
HLA-A-209ENST00000638375 DEFB129Q9H1M3 183 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 IL25Q9H293 177 aa23.34■■□□□ 1.33
HLA-A-209ENST00000638375 FLT1P17948 1338 aa23.33■■□□□ 1.33
HLA-A-209ENST00000638375 CDK5RAP2Q96SN8 1893 aa23.33■■□□□ 1.33
HLA-A-209ENST00000638375 ENTPD3O75355 529 aa23.33■■□□□ 1.33
HLA-A-209ENST00000638375 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.33
HLA-A-209ENST00000638375 ITGBL1O95965 494 aaPredicted RBP23.33■■□□□ 1.33
HLA-A-209ENST00000638375 MAPKAPK5Q8IW41 473 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms