RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 CPLX1O14810 134 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 AKNAD1Q5T1N1 836 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 SENP2Q9HC62 589 aa19.39■□□□□ 0.69
CTSD-213ENST00000637915 EP400Q96L91 3159 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 GOLGA6L4A6NEF3 574 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 APOA5Q6Q788 366 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 FUCA2Q9BTY2 467 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 ANKRD2Q9GZV1 360 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 CNNM2Q9H8M5 875 aa19.38■□□□□ 0.69
CTSD-213ENST00000637915 SEMA3EO15041 775 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
CTSD-213ENST00000637915 STAG1Q8WVM7 1258 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 LY9Q9HBG7 655 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 ZSWIM5Q9P217 1185 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 ORC3Q9UBD5 711 aaPredicted RBP19.37■□□□□ 0.69
CTSD-213ENST00000637915 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 KDM4AO75164 1064 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 METAP2P50579 478 aaKnown RBP eCLIP19.37■□□□□ 0.695e-7■■□□□ 12.4
CTSD-213ENST00000637915 NFIXQ14938 502 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 MFSD6Q6ZSS7 791 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 KRT23Q9C075 422 aa19.37■□□□□ 0.69
CTSD-213ENST00000637915 UBR3Q6ZT12 1888 aa19.36■□□□□ 0.69
CTSD-213ENST00000637915 TMEM67Q5HYA8 995 aa19.36■□□□□ 0.69
CTSD-213ENST00000637915 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
CTSD-213ENST00000637915 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
CTSD-213ENST00000637915 RIOK1Q9BRS2 568 aaKnown RBP19.36■□□□□ 0.69
CTSD-213ENST00000637915 PDS5AQ29RF7 1337 aaKnown RBP19.36■□□□□ 0.69
CTSD-213ENST00000637915 NPHP1O15259 732 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 LIFRP42702 1097 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
CTSD-213ENST00000637915 ZNF384Q8TF68 577 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 SDR42E1Q8WUS8 393 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 FTOQ9C0B1 505 aaKnown RBP eCLIP19.35■□□□□ 0.69
CTSD-213ENST00000637915 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 RXRAP19793 462 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 OTUD7BQ6GQQ9 843 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 FBXO18Q8NFZ0 1043 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 ZNF396Q96N95 335 aaPredicted RBP19.35■□□□□ 0.69
CTSD-213ENST00000637915 USP28Q96RU2 1077 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 NUP62CLQ9H1M0 184 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 DACT1Q9NYF0 836 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 TFCP2L1Q9NZI6 479 aa19.35■□□□□ 0.69
CTSD-213ENST00000637915 ZBTB43O43298 467 aa19.34■□□□□ 0.69
CTSD-213ENST00000637915 ADRA2BP18089 450 aa19.34■□□□□ 0.69
CTSD-213ENST00000637915 HIBADHP31937 336 aaKnown RBP19.34■□□□□ 0.69
CTSD-213ENST00000637915 MICU3Q86XE3 530 aa19.34■□□□□ 0.69
CTSD-213ENST00000637915 ECM29Q5VYK3 1845 aa19.34■□□□□ 0.69
CTSD-213ENST00000637915 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.33■□□□□ 0.69
CTSD-213ENST00000637915 IFIT3O14879 490 aaKnown RBP19.33■□□□□ 0.69
CTSD-213ENST00000637915 CDC27P30260 824 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 PPARAQ07869 468 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 NFXL1Q6ZNB6 911 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 CNBD1Q8NA66 436 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 BICD2Q8TD16 824 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 DDX19AQ9NUU7 478 aaKnown RBP19.33■□□□□ 0.69
CTSD-213ENST00000637915 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.69
CTSD-213ENST00000637915 ESPNB1AK53 854 aa19.33■□□□□ 0.68
CTSD-213ENST00000637915 MAST2Q6P0Q8 1798 aa19.33■□□□□ 0.68
CTSD-213ENST00000637915 NR1I2O75469 434 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 CDKL5O76039 1030 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 DYNLL1P63167 89 aaKnown RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 MAP3K11Q16584 847 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 UVSSAQ2YD98 709 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 RRP12Q5JTH9 1297 aaKnown RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 NSUN4Q96CB9 384 aaKnown RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 RNF41Q9H4P4 317 aaPredicted RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 QTRT2Q9H974 415 aaKnown RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 GJB4Q9NTQ9 266 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 NTRK3Q16288 839 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 CAMK4Q16566 473 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 CCDC144CPQ8IYA2 1237 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 RGS22Q8NE09 1264 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 MYL10Q9BUA6 226 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 TOMM22Q9NS69 142 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 FAM217BQ9NTX9 383 aaPredicted RBP19.32■□□□□ 0.68
CTSD-213ENST00000637915 SLC12A7Q9Y666 1083 aa19.32■□□□□ 0.68
CTSD-213ENST00000637915 NID2Q14112 1375 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 CCDC69A6NI79 296 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 GRAPQ13588 217 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 CPLX2Q6PUV4 134 aaKnown RBP19.31■□□□□ 0.68
CTSD-213ENST00000637915 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
CTSD-213ENST00000637915 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 CLSTN2Q9H4D0 955 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 BRWD3Q6RI45 1802 aa19.31■□□□□ 0.68
CTSD-213ENST00000637915 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 MECOMQ03112 1051 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 PRR5LQ6MZQ0 368 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 SLC51AQ86UW1 340 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 PHKBQ93100 1093 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 ZKSCAN3Q9BRR0 538 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 MTA3Q9BTC8 594 aa19.3■□□□□ 0.68
CTSD-213ENST00000637915 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms