RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RFX7Q2KHR2 1363 aa19.33■□□□□ 0.69
CLN6-216ENST00000636876 ASTN2O75129 1339 aaPredicted RBP19.33■□□□□ 0.69
CLN6-216ENST00000636876 RNF113AO15541 343 aaKnown RBP19.33■□□□□ 0.68
CLN6-216ENST00000636876 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 POTEJP0CG39 1038 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 SDSP20132 328 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 BTDP43251 543 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 SLFNL1Q499Z3 407 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 LDHDQ86WU2 507 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
CLN6-216ENST00000636876 ZC3H15Q8WU90 426 aaKnown RBP19.33■□□□□ 0.68
CLN6-216ENST00000636876 TDRD3Q9H7E2 651 aaKnown RBP19.33■□□□□ 0.68
CLN6-216ENST00000636876 PGAP2Q9UHJ9 254 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 AK9Q5TCS8 1911 aa19.33■□□□□ 0.68
CLN6-216ENST00000636876 MYO1BO43795 1136 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 CHGBP05060 677 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 PPP4CP60510 307 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 SPDYE2Q495Y8 402 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 CDC42EP5Q6NZY7 148 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 NOL10Q9BSC4 688 aaKnown RBP19.32■□□□□ 0.68
CLN6-216ENST00000636876 GGA3Q9NZ52 723 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 ZNF70Q9UC06 446 aaPredicted RBP19.32■□□□□ 0.68
CLN6-216ENST00000636876 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
CLN6-216ENST00000636876 CLRN2A0PK11 232 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 BAG3O95817 575 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 DNAJC5GQ8N7S2 189 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 CLEC11AQ9Y240 323 aa19.31■□□□□ 0.68
CLN6-216ENST00000636876 PITPNM2Q9BZ72 1349 aa19.3■□□□□ 0.68
CLN6-216ENST00000636876 RHBDL3P58872 404 aa19.3■□□□□ 0.68
CLN6-216ENST00000636876 HTRA3P83110 453 aa19.3■□□□□ 0.68
CLN6-216ENST00000636876 ANGEL2Q5VTE6 544 aaKnown RBP19.3■□□□□ 0.68
CLN6-216ENST00000636876 MIGA1Q8NAN2 632 aa19.3■□□□□ 0.68
CLN6-216ENST00000636876 APPBP2Q92624 585 aa19.3■□□□□ 0.68
CLN6-216ENST00000636876 AATFQ9NY61 560 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLN6-216ENST00000636876 MAGEB6P1A0A0J9YX57 407 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 PLCG2P16885 1265 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 DYNLL1P63167 89 aaKnown RBP19.29■□□□□ 0.68
CLN6-216ENST00000636876 ZMYM1Q5SVZ6 1142 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 CERS3Q8IU89 383 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 OSBP2Q969R2 916 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 TMOD2Q9NZR1 351 aa19.29■□□□□ 0.68
CLN6-216ENST00000636876 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
CLN6-216ENST00000636876 APOBEC3FQ8IUX4 373 aaKnown RBP19.28■□□□□ 0.68
CLN6-216ENST00000636876 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
CLN6-216ENST00000636876 DCPSQ96C86 337 aaKnown RBP19.28■□□□□ 0.68
CLN6-216ENST00000636876 RIOK1Q9BRS2 568 aaKnown RBP19.28■□□□□ 0.68
CLN6-216ENST00000636876 VEZTQ9HBM0 779 aa19.28■□□□□ 0.68
CLN6-216ENST00000636876 POLR2AP24928 1970 aaKnown RBP19.28■□□□□ 0.68
CLN6-216ENST00000636876 HIP1O00291 1037 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 MBD4O95243 580 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 CACNB3P54284 484 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 TEX11Q8IYF3 940 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
CLN6-216ENST00000636876 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.68
CLN6-216ENST00000636876 WDHD1O75717 1129 aaPredicted RBP19.26■□□□□ 0.67
CLN6-216ENST00000636876 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
CLN6-216ENST00000636876 KRT26Q7Z3Y9 468 aa19.26■□□□□ 0.67
CLN6-216ENST00000636876 LCORLQ8N3X6 602 aa19.26■□□□□ 0.67
CLN6-216ENST00000636876 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
CLN6-216ENST00000636876 IDI2Q9BXS1 227 aa19.26■□□□□ 0.67
CLN6-216ENST00000636876 ARMT1Q9H993 441 aa19.26■□□□□ 0.67
CLN6-216ENST00000636876 A0A0D9SFI3 127 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 TCP10L2B9ZVM9 353 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 M0R2C6 588 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 FSTL1Q12841 308 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 NFIAQ12857 509 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 NMIQ13287 307 aaPredicted RBP19.25■□□□□ 0.67
CLN6-216ENST00000636876 TNFAIP1Q13829 316 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
CLN6-216ENST00000636876 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 FAM198AQ9UFP1 575 aa19.25■□□□□ 0.67
CLN6-216ENST00000636876 SCAF8Q9UPN6 1271 aaKnown RBP19.25■□□□□ 0.67
CLN6-216ENST00000636876 CHMLP26374 656 aa19.24■□□□□ 0.67
CLN6-216ENST00000636876 CDC37L1Q7L3B6 337 aa19.24■□□□□ 0.67
CLN6-216ENST00000636876 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
CLN6-216ENST00000636876 FAM83AQ86UY5 434 aa19.24■□□□□ 0.67
CLN6-216ENST00000636876 SMC1BQ8NDV3 1235 aa19.24■□□□□ 0.67
CLN6-216ENST00000636876 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
CLN6-216ENST00000636876 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
CLN6-216ENST00000636876 DDX4Q9NQI0 724 aaKnown RBP19.24■□□□□ 0.67
CLN6-216ENST00000636876 CNTNAP1P78357 1384 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 CDK5RAP2Q96SN8 1893 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 GPAA1O43292 621 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
CLN6-216ENST00000636876 TNNI2P48788 182 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 RASA3Q14644 834 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 STRBPQ96SI9 672 aaKnown RBP19.23■□□□□ 0.67
CLN6-216ENST00000636876 DEFB129Q9H1M3 183 aa19.23■□□□□ 0.67
CLN6-216ENST00000636876 ENTPD3O75355 529 aa19.22■□□□□ 0.67
CLN6-216ENST00000636876 PICALMQ13492 652 aa19.22■□□□□ 0.67
CLN6-216ENST00000636876 MCMDC2Q4G0Z9 681 aa19.22■□□□□ 0.67
CLN6-216ENST00000636876 CWC27Q6UX04 472 aaKnown RBP19.22■□□□□ 0.67
CLN6-216ENST00000636876 FAM151AQ8WW52 585 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms