RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 CYP7A1P22680 504 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 BTDP43251 543 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 HUNKP57058 714 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 FMR1Q06787 632 aaKnown RBP eCLIP9.97□□□□□ -0.81
PNKP-226ENST00000636840 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 CDC42EP5Q6NZY7 148 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 FAM151AQ8WW52 585 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 HHIPL1Q96JK4 782 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 HAUS7Q99871 368 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 PAG1Q9NWQ8 432 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 TLL2Q9Y6L7 1015 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 TTC41PQ6P2S7 1318 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 MYH13Q9UKX3 1938 aa9.97□□□□□ -0.81
PNKP-226ENST00000636840 UNCXA6NJT0 531 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 ENTPD3O75355 529 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 PPP4CP60510 307 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 SLC9C2Q5TAH2 1124 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 PRAMEF18Q5VWM3 479 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 DCAF15Q66K64 600 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 SAPCD2Q86UD0 394 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 ZSCAN29Q8IWY8 852 aaPredicted RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 SMC5Q8IY18 1101 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 CCDC102AQ96A19 550 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 SCAF8Q9UPN6 1271 aaKnown RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 GAKO14976 1311 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 COL1A1P02452 1464 aaPredicted RBP9.96□□□□□ -0.82
PNKP-226ENST00000636840 ADAMTSL1Q8N6G6 1762 aa9.96□□□□□ -0.82
PNKP-226ENST00000636840 RASSF10A6NK89 507 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 IGHDP01880 384 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 MX1P20591 662 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 ZNF157P51786 506 aaPredicted RBP9.95□□□□□ -0.82
PNKP-226ENST00000636840 HTRA3P83110 453 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 PRKG1Q13976 671 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 RGMBQ6NW40 437 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 TEX11Q8IYF3 940 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 MAGEB6Q8N7X4 407 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 KLRG1Q96E93 195 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 SLC10A4Q96EP9 437 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 IDI2Q9BXS1 227 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 ANTXR1Q9H6X2 564 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
PNKP-226ENST00000636840 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
PNKP-226ENST00000636840 ARAP2Q8WZ64 1704 aa9.95□□□□□ -0.82
PNKP-226ENST00000636840 UBE2Q2LH0YL09 131 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
PNKP-226ENST00000636840 ZFYP08048 801 aaPredicted RBP9.94□□□□□ -0.82
PNKP-226ENST00000636840 RGS3P49796 1198 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 CACNB3P54284 484 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 TCP10Q12799 353 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 GRM1Q13255 1194 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 NBPF12Q5TAG4 269 aaPredicted RBP9.94□□□□□ -0.82
PNKP-226ENST00000636840 DLK2Q6UY11 383 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 DNAJC5GQ8N7S2 189 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 TMEM39BQ9GZU3 492 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 AATFQ9NY61 560 aaKnown RBP eCLIP9.94□□□□□ -0.82
PNKP-226ENST00000636840 NDUFB9Q9Y6M9 179 aa9.94□□□□□ -0.82
PNKP-226ENST00000636840 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 MAP2K2P36507 400 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 USP5P45974 858 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 NUCB1Q02818 461 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 PICALMQ13492 652 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 UBE3CQ15386 1083 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
PNKP-226ENST00000636840 ANKRD13AQ8IZ07 590 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 CAPNS2Q96L46 248 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
PNKP-226ENST00000636840 CNTNAP1P78357 1384 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 USP2O75604 605 aaPredicted RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 PDE6AP16499 860 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 VEGFBP49765 207 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 PDE1AP54750 535 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 RHBDL3P58872 404 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 MAP3K9P80192 1104 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 MAP2K1Q02750 393 aaPredicted RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 NOGQ13253 232 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 KBTBD3Q8NAB2 608 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 ZNF341Q9BYN7 854 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 CRNKL1Q9BZJ0 848 aaKnown RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 DHX36Q9H2U1 1008 aaKnown RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.92□□□□□ -0.82
PNKP-226ENST00000636840 FAM198AQ9UFP1 575 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 CSADQ9Y600 493 aa9.92□□□□□ -0.82
PNKP-226ENST00000636840 ZNF646O15015 1829 aaPredicted RBP9.91□□□□□ -0.82
PNKP-226ENST00000636840 AOX1Q06278 1338 aa9.91□□□□□ -0.82
PNKP-226ENST00000636840 ZNF532Q9HCE3 1301 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms