RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
PCCA-213ENST00000636475 MRPS27Q92552 414 aaKnown RBP11.64□□□□□ -0.55
PCCA-213ENST00000636475 GNL3LQ9NVN8 582 aaKnown RBP11.64□□□□□ -0.55
PCCA-213ENST00000636475 USP21Q9UK80 565 aa11.64□□□□□ -0.55
PCCA-213ENST00000636475 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
PCCA-213ENST00000636475 STK36Q9NRP7 1315 aa11.64□□□□□ -0.55
PCCA-213ENST00000636475 ZBTB43O43298 467 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 MBD4O95243 580 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 ZNF165P49910 485 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 RCAN1P53805 252 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 CHRNDQ07001 517 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 SNW1Q13573 536 aaKnown RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 STK38Q15208 465 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 SYNE3Q6ZMZ3 975 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 CYB5R4Q7L1T6 521 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 LINC00301Q8NCQ3 95 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 RNF41Q9H4P4 317 aaPredicted RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 ZNF804BA4D1E1 1349 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 B4E1Z4 1266 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 UBE4AQ14139 1066 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 SF3A1Q15459 793 aaKnown RBP11.63□□□□□ -0.55
PCCA-213ENST00000636475 AKNAD1Q5T1N1 836 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 FSIP1Q8NA03 581 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 IGDCC4Q8TDY8 1250 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 WASF1Q92558 559 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 LY9Q9HBG7 655 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
PCCA-213ENST00000636475 NEDD4P46934 1319 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 GSG1L2A8MUP6 293 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 NFXL1Q6ZNB6 911 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 LUZP1Q86V48 1076 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 ANKRD18AQ8IVF6 992 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 TMTC2Q8N394 836 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 EPB41L4AQ9HCS5 686 aaPredicted RBP11.62□□□□□ -0.55
PCCA-213ENST00000636475 ANO10Q9NW15 660 aa11.62□□□□□ -0.55
PCCA-213ENST00000636475 COL24A1Q17RW2 1714 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 CCDC69A6NI79 296 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 SPTLC2O15270 562 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 AP5Z1O43299 807 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 TDO2P48775 406 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 BCAMP50895 628 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
PCCA-213ENST00000636475 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
PCCA-213ENST00000636475 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCCA-213ENST00000636475 NAT10Q9H0A0 1025 aaKnown RBP11.61□□□□□ -0.55
PCCA-213ENST00000636475 ARMT1Q9H993 441 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 BSDC1Q9NW68 430 aaPredicted RBP11.61□□□□□ -0.55
PCCA-213ENST00000636475 LRP2BPQ9P2M1 347 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 SLC4A4Q9Y6R1 1079 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 GOLGA8AA7E2F4 631 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 CDC25BP30305 580 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
PCCA-213ENST00000636475 TRIM29Q14134 588 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 SARM1Q6SZW1 724 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 PLA2G4DQ86XP0 818 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 JMYQ8N9B5 988 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 DNAJC25Q9H1X3 360 aa11.61□□□□□ -0.55
PCCA-213ENST00000636475 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 ERICH2A1L162 156 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 IFIT3O14879 490 aaKnown RBP11.6□□□□□ -0.55
PCCA-213ENST00000636475 SEMA3EO15041 775 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 ADRA2BP18089 450 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 SPTLC3Q9NUV7 552 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 ZSWIM5Q9P217 1185 aa11.6□□□□□ -0.55
PCCA-213ENST00000636475 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
PCCA-213ENST00000636475 CCDC196A0A1B0GTZ2 297 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 ZBTB22O15209 634 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 PPP6R2O75170 966 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
PCCA-213ENST00000636475 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
PCCA-213ENST00000636475 CMA1P23946 247 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 ZNF75DP51815 510 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 NOLC1Q14978 699 aaKnown RBP eCLIP11.59□□□□□ -0.55
PCCA-213ENST00000636475 VPS72Q15906 364 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 NTRK3Q16288 839 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
PCCA-213ENST00000636475 KRT40Q6A162 431 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 OTUD7BQ6GQQ9 843 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 MICU3Q86XE3 530 aa11.59□□□□□ -0.55
PCCA-213ENST00000636475 CEP57L1Q8IYX8 460 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms