RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 DPEP1P16444 411 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
NEDD4L-238ENST00000635997 UPF1Q92900 1129 aaKnown RBP eCLIP16.41■□□□□ 0.224e-8■■■□□ 15.3
NEDD4L-238ENST00000635997 SGSM2O43147 1006 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 DNA2P51530 1060 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 GREM2Q9H772 168 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 BCAMP50895 628 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 CCDC102BQ68D86 513 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 APPBP2Q92624 585 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 PLIN2Q99541 437 aa16.41■□□□□ 0.22
NEDD4L-238ENST00000635997 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 UIMC1Q96RL1 719 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 SYKP43405 635 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 UBE2HP62256 183 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 GPS2Q13227 327 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 TBC1D10BQ4KMP7 808 aaPredicted RBP16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 IQGAP3Q86VI3 1631 aa16.4■□□□□ 0.22
NEDD4L-238ENST00000635997 B4DLN1 442 aa16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 CBFA2T2O43439 604 aa16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 SFPQP23246 707 aaKnown RBP eCLIP16.39■□□□□ 0.221e-6■□□□□ 9.7
NEDD4L-238ENST00000635997 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 SSH3Q8TE77 659 aa16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 DDX19AQ9NUU7 478 aaKnown RBP16.39■□□□□ 0.22
NEDD4L-238ENST00000635997 SYT1P21579 422 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 SLC27A2O14975 620 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 CTSWP56202 376 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 SP4Q02446 784 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 ZBTB38Q8NAP3 1195 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 TRMT1Q9NXH9 659 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 XDHP47989 1333 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 F13A1P00488 732 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 GNAT2P19087 354 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 CALML4Q96GE6 196 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 GPCPD1Q9NPB8 672 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 NOD1Q9Y239 953 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 ABCC4O15439 1325 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 CEP152O94986 1710 aa16.39■□□□□ 0.21
NEDD4L-238ENST00000635997 CDC42BPGQ6DT37 1551 aa16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.38■□□□□ 0.219e-8■■■■■ 139
NEDD4L-238ENST00000635997 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 TMX1Q9H3N1 280 aa16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-238ENST00000635997 CAPN15O75808 1086 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 SNX14Q9Y5W7 946 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 UNC13BO14795 1591 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 ARHGAP29Q52LW3 1261 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 SSR1P43307 286 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 KRT26Q7Z3Y9 468 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 COL15A1P39059 1388 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 CACNA2D4Q7Z3S7 1137 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
NEDD4L-238ENST00000635997 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 TOP1P11387 765 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 MTIF2P46199 727 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 GNAQP50148 359 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 LMTK2Q8IWU2 1503 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 DHX58Q96C10 678 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 ARGLU1Q9NWB6 273 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-238ENST00000635997 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 SNAP23O00161 211 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 VEGFAP15692 232 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CNGA1P29973 690 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 ADORA1P30542 326 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PHKBQ93100 1093 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
NEDD4L-238ENST00000635997 CLIP2Q9UDT6 1046 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms