RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ARHGAP24Q8N264 748 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 TFIP11Q9UBB9 837 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 EHBP1L1Q8N3D4 1523 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 CNGA4Q8IV77 575 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 ARFGAP2Q8N6H7 521 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 RFC1P35251 1148 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 GPR162Q16538 588 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 OTUD7BQ6GQQ9 843 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 C4orf50Q6ZRC1 276 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 BAG5Q9UL15 447 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 WWC3Q9ULE0 1092 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 LUC7L2Q9Y383 392 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 H0YIN7 160 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 TNFAIP3P21580 790 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 XPAP23025 273 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 FAM47CQ5HY64 1035 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 AMOTL2Q9Y2J4 779 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 H7C1D1 291 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 MCMDC2Q4G0Z9 681 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 DNAJC21Q5F1R6 531 aaKnown RBP6.2□□□□□ -1.42
SCN1A-209ENST00000635750 IFT81Q8WYA0 676 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 CSADQ9Y600 493 aa6.2□□□□□ -1.42
SCN1A-209ENST00000635750 STK25O00506 426 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 CLGNO14967 610 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 MYCLP12524 364 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 MAPK8IP2Q13387 824 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 TMTC4Q5T4D3 741 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 PARD3BQ8TEW8 1205 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 SKA2Q8WVK7 121 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 RABGAP1Q9Y3P9 1069 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ADCY5O95622 1261 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 DCUN1D2Q6PH85 259 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ITM2BQ9Y287 266 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ARHGEF35A5YM69 484 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 PHLDB2Q86SQ0 1253 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 PALM2Q8IXS6 379 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 MAGEB6Q8N7X4 407 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 PKD2L1Q9P0L9 805 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 CCPG1Q9ULG6 757 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 RAPGEF3O95398 923 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ZNF853P0CG23 659 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 FLIIQ13045 1269 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 PABPC4Q13310 644 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 CHMP6Q96FZ7 201 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 RSRC1Q96IZ7 334 aaKnown RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 TLDC2A0PJX2 215 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 KRT19P08727 400 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 OTUD6AQ7L8S5 288 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 DZIP3Q86Y13 1208 aaKnown RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 SEPT8Q92599 483 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 DHX58Q96C10 678 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 KIF14Q15058 1648 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 ATF7P17544 494 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-209ENST00000635750 CDC37L1Q7L3B6 337 aa6.19□□□□□ -1.42
SCN1A-209ENST00000635750 S100BP04271 92 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 POLR2BP30876 1174 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 MCM6Q14566 821 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 RBBP5Q15291 538 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 GBP6Q6ZN66 633 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PPP4R1Q8TF05 950 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 HAUS1Q96CS2 278 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 SRRTQ9BXP5 876 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CCDC68Q9H2F9 335 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 ANAPC5Q9UJX4 755 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 KIAA1107Q9UPP5 1409 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CAPN9O14815 690 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PPFIA3O75145 1194 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TUBB4AP04350 444 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 UVSSAQ2YD98 709 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 SLC9C2Q5TAH2 1124 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TPCN1Q9ULQ1 816 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 IQSEC3Q9UPP2 1182 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 IRX4P78413 519 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 NUCB1Q02818 461 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 WAPLQ7Z5K2 1190 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PKNOX2Q96KN3 472 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 AS3MTQ9HBK9 375 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 RNF216Q9NWF9 866 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 NPHP3Q7Z494 1330 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 F6X3S4 739 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 BCRP11274 1271 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 KRT10P13645 584 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 MAN1A1P33908 653 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 ITKQ08881 620 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 HS1BP3Q53T59 392 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 PDZD4Q76G19 769 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CEP57Q86XR8 500 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 NUCKS1Q9H1E3 243 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 F8W8V4 182 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 EBAG9O00559 213 aa6.18□□□□□ -1.42
SCN1A-209ENST00000635750 CCNT1O60563 726 aaKnown RBP6.18□□□□□ -1.42
SCN1A-209ENST00000635750 TMCO4Q5TGY1 634 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms