RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 GOLIM4O00461 696 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
LINC00339-210ENST00000635675 BTDP43251 543 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-210ENST00000635675 SAPCD2Q86UD0 394 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 FAM83AQ86UY5 434 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 TEPSINQ96N21 525 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 DNAJC2Q99543 621 aaKnown RBP11.85□□□□□ -0.51
LINC00339-210ENST00000635675 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-210ENST00000635675 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
LINC00339-210ENST00000635675 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TTC41PQ6P2S7 1318 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TNNI2P48788 182 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 RHBDL3P58872 404 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 NUCB1Q02818 461 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 MAP3K12Q12852 859 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TMED8Q6PL24 325 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-210ENST00000635675 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 C2orf69Q8N8R5 385 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 EDC3Q96F86 508 aaKnown RBP11.84□□□□□ -0.51
LINC00339-210ENST00000635675 GPATCH3Q96I76 525 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
LINC00339-210ENST00000635675 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-210ENST00000635675 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
LINC00339-210ENST00000635675 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 WDHD1O75717 1129 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-210ENST00000635675 MAP4K4O95819 1239 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-210ENST00000635675 MX1P20591 662 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 PPP4CP60510 307 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 FKBP1BP68106 108 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 NFIAQ12857 509 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 DEFB115Q30KQ5 88 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 NBPF12Q5TAG4 269 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-210ENST00000635675 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
LINC00339-210ENST00000635675 CYP7A1P22680 504 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 NF2P35240 595 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 MAGEB6Q8N7X4 407 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 PI4K2BQ8TCG2 481 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 KLRG1Q96E93 195 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 HHIPL1Q96JK4 782 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
LINC00339-210ENST00000635675 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 SSC5DA1L4H1 1573 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 ERC2O15083 957 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
LINC00339-210ENST00000635675 GLRX3O76003 335 aaKnown RBP11.81□□□□□ -0.52
LINC00339-210ENST00000635675 BAG3O95817 575 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 PDE6AP16499 860 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 PDE1AP54750 535 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 HUNKP57058 714 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 TCP10Q12799 353 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 SLC9C2Q5TAH2 1124 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 ZFPM1Q8IX07 1006 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 AATFQ9NY61 560 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00339-210ENST00000635675 MKRN1Q9UHC7 482 aaKnown RBP11.81□□□□□ -0.52
LINC00339-210ENST00000635675 PAPPA2Q9BXP8 1791 aa11.81□□□□□ -0.52
LINC00339-210ENST00000635675 TCRBV5S4A2TA0A5A2 114 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 UBE2Q2LH0YL09 131 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 ENTPD3O75355 529 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 PLCG2P16885 1265 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 RGS3P49796 1198 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-210ENST00000635675 NOL10Q9BSC4 688 aaKnown RBP11.8□□□□□ -0.52
LINC00339-210ENST00000635675 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
LINC00339-210ENST00000635675 RPAP1Q9BWH6 1393 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-210ENST00000635675 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
LINC00339-210ENST00000635675 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-210ENST00000635675 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-210ENST00000635675 ADD2P35612 726 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 VEGFBP49765 207 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 DYNLL1P63167 89 aaKnown RBP11.79□□□□□ -0.52
LINC00339-210ENST00000635675 PRKG1Q13976 671 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-210ENST00000635675 LDLRAD1Q5T700 205 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 PLEKHM2Q8IWE5 1019 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 TEX11Q8IYF3 940 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 KBTBD3Q8NAB2 608 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 MIGA1Q8NAN2 632 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00339-210ENST00000635675 FZD1Q9UP38 647 aa11.79□□□□□ -0.52
LINC00339-210ENST00000635675 CHGBP05060 677 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 PICALMQ13492 652 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 SLFNL1Q499Z3 407 aa11.78□□□□□ -0.52
LINC00339-210ENST00000635675 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms