RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	JAG2	Q9Y219	1238 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	MYO15B	Q96JP2	1530 aa		4.87	□□□□□ -1.63
SMARCB1-208	ENST00000634926	LEFTY1	O75610	366 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PDGFA	P04085	211 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	FAM87A	P0C7U9	286 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	RAP1GAP	P47736	663 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	DNM1	Q05193	864 aa	Known RBP	4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	MISP3	Q96FF7	219 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	AP4E1	Q9UPM8	1137 aa		4.86	□□□□□ -1.63
SMARCB1-208	ENST00000634926	TSPAN15	O95858	294 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PRKCQ	Q04759	706 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	AOC3	Q16853	763 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	SPRED3	Q2MJR0	410 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	C8orf34	Q49A92	452 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ZSWIM9	Q86XI8	627 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	ABTB2	Q8N961	1025 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	FLAD1	Q8NFF5	587 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	TOX2	Q96NM4	488 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	KCNK12	Q9HB15	430 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	VAV3	Q9UKW4	847 aa		4.85	□□□□□ -1.63
SMARCB1-208	ENST00000634926	C1QTNF9	P0C862	333 aa		4.84	□□□□□ -1.63
SMARCB1-208	ENST00000634926	OXCT1	P55809	520 aa		4.84	□□□□□ -1.63
SMARCB1-208	ENST00000634926	POU4F3	Q15319	338 aa		4.84	□□□□□ -1.63
SMARCB1-208	ENST00000634926	PRR23B	Q6ZRT6	265 aa		4.84	□□□□□ -1.63
SMARCB1-208	ENST00000634926	C14orf37	Q86TY3	774 aa		4.84	□□□□□ -1.63
SMARCB1-208	ENST00000634926	BICRA	Q9NZM4	1560 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	AOC2	O75106	756 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	TNFRSF21	O75509	655 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	GRIA4	P48058	902 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	PCDH1	Q08174	1060 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	SIAH1	Q8IUQ4	282 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	WDR89	Q96FK6	387 aa	Predicted RBP	4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	C20orf173	Q96LM9	149 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	WDR18	Q9BV38	432 aa		4.83	□□□□□ -1.64
SMARCB1-208	ENST00000634926	POLR3D	P05423	398 aa	Predicted RBP	4.82	□□□□□ -1.64
SMARCB1-208	ENST00000634926	SRPK2	P78362	688 aa	Known RBP	4.82	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CYP27C1	Q4G0S4	372 aa		4.82	□□□□□ -1.64
SMARCB1-208	ENST00000634926	SLC23A3	Q6PIS1	610 aa		4.82	□□□□□ -1.64
SMARCB1-208	ENST00000634926		A0A096LPE4	126 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926		A0A1W2PPZ6	126 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	TMPRSS2	O15393	492 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	INHBB	P09529	407 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	KCNMB1	Q16558	191 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	TMEM164	Q5U3C3	297 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	PMEPA1	Q969W9	287 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	TCF12	Q99081	682 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	KRTAP9-8	Q9BYQ0	159 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	RAD18	Q9NS91	495 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	FAM53C	Q9NYF3	392 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CTNND2	Q9UQB3	1225 aa		4.81	□□□□□ -1.64
SMARCB1-208	ENST00000634926	RBAK-RBAKDN	I3L0D1	243 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	PHACTR2	O75167	634 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CEACAM5	P06731	702 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	EDN3	P14138	238 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	ELOA	Q14241	798 aa	Known RBP	4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	IFI16	Q16666	785 aa	Known RBP	4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	HRASLS5	Q96KN8	279 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	HEXIM2	Q96MH2	286 aa	Known RBP	4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CLEC4M	Q9H2X3	399 aa	Predicted RBP	4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	POLI	Q9UNA4	740 aa		4.8	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CYP11A1	P05108	521 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	LIG1	P18858	919 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	MZF1	P28698	734 aa	Predicted RBP	4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	EIF1AX	P47813	144 aa	Known RBP	4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	FAM214B	Q7L5A3	538 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	AMIGO3	Q86WK7	504 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	ANKLE2	Q86XL3	938 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CCNJL	Q8IV13	435 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	DUSP23	Q9BVJ7	150 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	TNKS2	Q9H2K2	1166 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	DISC1	Q9NRI5	854 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926	SHROOM4	Q9ULL8	1493 aa		4.79	□□□□□ -1.64
SMARCB1-208	ENST00000634926		A0A1W2PP55	124 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	NPIPB6	E9PJ23	425 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	ITIH2	P19823	946 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	MPST	P25325	297 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	KRTAP10-2	P60368	255 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	MTMR3	Q13615	1198 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	ANGEL2	Q5VTE6	544 aa	Known RBP	4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	CLP1	Q92989	425 aa	Known RBP	4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	FANCD2OS	Q96PS1	177 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	C19orf73	Q9NVV2	129 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	RAPGEFL1	Q9UHV5	662 aa		4.78	□□□□□ -1.64
SMARCB1-208	ENST00000634926	DCAF1	Q9Y4B6	1507 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	PITPNM2	Q9BZ72	1349 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	ZNF862	O60290	1169 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	B3GALT4	O96024	378 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	RPLP1	P05386	114 aa	Known RBP	4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	HOXA5	P20719	270 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	NOM1	Q5C9Z4	860 aa	Known RBP	4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	HELQ	Q8TDG4	1101 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	CCDC86	Q9H6F5	360 aa	Known RBP	4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	ZFYVE28	Q9HCC9	887 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	PCDHGC5	Q9Y5F6	944 aa		4.77	□□□□□ -1.65
SMARCB1-208	ENST00000634926	ZCCHC6	Q5VYS8	1495 aa	Known RBP	4.76	□□□□□ -1.65
SMARCB1-208	ENST00000634926	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.76	□□□□□ -1.65

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