RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 TICAM2Q86XR7 235 aa20.12■□□□□ 0.81
CDC42EP4-209ENST00000630622 RILPL2Q969X0 211 aa20.12■□□□□ 0.81
CDC42EP4-209ENST00000630622 PGAP2Q9UHJ9 254 aa20.12■□□□□ 0.81
CDC42EP4-209ENST00000630622 CDK5RAP2Q96SN8 1893 aa20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 BTDP43251 543 aa20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 BMP2KLQ5H9B9 411 aa20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 TDRD3Q9H7E2 651 aaKnown RBP20.11■□□□□ 0.81
CDC42EP4-209ENST00000630622 RHBDL3P58872 404 aa20.1■□□□□ 0.81
CDC42EP4-209ENST00000630622 PPP4CP60510 307 aa20.1■□□□□ 0.81
CDC42EP4-209ENST00000630622 LRRFIP1Q32MZ4 808 aaKnown RBP20.1■□□□□ 0.81
CDC42EP4-209ENST00000630622 CDC42EP5Q6NZY7 148 aa20.1■□□□□ 0.81
CDC42EP4-209ENST00000630622 LDHDQ86WU2 507 aa20.1■□□□□ 0.81
CDC42EP4-209ENST00000630622 FOCADQ5VW36 1801 aa20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 CLRN2A0PK11 232 aa20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 MIGA1Q8NAN2 632 aa20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 AATFQ9NY61 560 aaKnown RBP eCLIP20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 GGA3Q9NZ52 723 aa20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 ZNF70Q9UC06 446 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP4-209ENST00000630622 PITPNM2Q9BZ72 1349 aa20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 MYO1BO43795 1136 aa20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 DYNLL1P63167 89 aaKnown RBP20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 ZMYM1Q5SVZ6 1142 aa20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 APPBP2Q92624 585 aa20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 RIOK1Q9BRS2 568 aaKnown RBP20.08■□□□□ 0.81
CDC42EP4-209ENST00000630622 BAG3O95817 575 aa20.07■□□□□ 0.8
CDC42EP4-209ENST00000630622 OSBP2Q969R2 916 aa20.07■□□□□ 0.8
CDC42EP4-209ENST00000630622 NOL10Q9BSC4 688 aaKnown RBP20.07■□□□□ 0.8
CDC42EP4-209ENST00000630622 PUS7LQ9H0K6 701 aaKnown RBP20.07■□□□□ 0.8
CDC42EP4-209ENST00000630622 USP40Q9NVE5 1235 aa20.07■□□□□ 0.8
CDC42EP4-209ENST00000630622 MAGEB6P1A0A0J9YX57 407 aa20.06■□□□□ 0.8
CDC42EP4-209ENST00000630622 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
CDC42EP4-209ENST00000630622 CLEC11AQ9Y240 323 aa20.06■□□□□ 0.8
CDC42EP4-209ENST00000630622 M0R2C6 588 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 WDHD1O75717 1129 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 MBD4O95243 580 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 PLCG2P16885 1265 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 CACNB3P54284 484 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 FKBP1CQ5VVH2 108 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 CERS3Q8IU89 383 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 APOBEC3FQ8IUX4 373 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 FAM227BQ96M60 508 aa20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 SEC62Q99442 399 aaKnown RBP20.05■□□□□ 0.8
CDC42EP4-209ENST00000630622 A0A0D9SFI3 127 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 NFIAQ12857 509 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 MAP1SQ66K74 1059 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 CHADLQ6NUI6 762 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 IDI2Q9BXS1 227 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 FAM198AQ9UFP1 575 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 SCAF8Q9UPN6 1271 aaKnown RBP20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 CNTNAP1P78357 1384 aa20.04■□□□□ 0.8
CDC42EP4-209ENST00000630622 HIP1O00291 1037 aa20.03■□□□□ 0.8
CDC42EP4-209ENST00000630622 TOMM70O94826 608 aa20.03■□□□□ 0.8
CDC42EP4-209ENST00000630622 TEX11Q8IYF3 940 aa20.03■□□□□ 0.8
CDC42EP4-209ENST00000630622 DDX4Q9NQI0 724 aaKnown RBP20.03■□□□□ 0.8
CDC42EP4-209ENST00000630622 HELLSQ9NRZ9 838 aa20.03■□□□□ 0.8
CDC42EP4-209ENST00000630622 TCP10L2B9ZVM9 353 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 NPM3O75607 178 aaKnown RBP20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 CHMLP26374 656 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 FAM83AQ86UY5 434 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 RBM46Q8TBY0 533 aaKnown RBP20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 AIDAQ96BJ3 306 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 STRBPQ96SI9 672 aaKnown RBP20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 GLIS2Q9BZE0 524 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 DIAPH3Q9NSV4 1193 aa20.02■□□□□ 0.8
CDC42EP4-209ENST00000630622 DDX60LQ5H9U9 1706 aaKnown RBP20.02■□□□□ 0.79
CDC42EP4-209ENST00000630622 NAV1Q8NEY1 1877 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 ADM5C9JUS6 153 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 GPAA1O43292 621 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 TNFAIP1Q13829 316 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 USP48Q86UV5 1035 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 SULF1Q8IWU6 871 aa20.01■□□□□ 0.79
CDC42EP4-209ENST00000630622 ENTPD3O75355 529 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 ITGBL1O95965 494 aaPredicted RBP20■□□□□ 0.79
CDC42EP4-209ENST00000630622 RASA3Q14644 834 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 MCMDC2Q4G0Z9 681 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
CDC42EP4-209ENST00000630622 DLK2Q6UY11 383 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 CCDC129Q6ZRS4 1044 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 CDC37L1Q7L3B6 337 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 SMC1BQ8NDV3 1235 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 TGFBRAP1Q8WUH2 860 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 CRNKL1Q9BZJ0 848 aaKnown RBP20■□□□□ 0.79
CDC42EP4-209ENST00000630622 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 MYH1P12882 1939 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 FLT1P17948 1338 aa20■□□□□ 0.79
CDC42EP4-209ENST00000630622 PRKAB2O43741 272 aa19.99■□□□□ 0.79
CDC42EP4-209ENST00000630622 TNNI2P48788 182 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms