RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MTUS1Q9ULD2 1270 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 CTNND2Q9UQB3 1225 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
SHPRH-211ENST00000629427 TRAF5O00463 557 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 TRPC3Q13507 836 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 PPP1R21Q6ZMI0 780 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 DAAM2Q86T65 1068 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 NACA2Q9H009 215 aa13.2□□□□□ -0.3
SHPRH-211ENST00000629427 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 ZNF569Q5MCW4 686 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 PRKG1Q13976 671 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 H0YIN7 160 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 GABPAQ06546 454 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 TTC14Q96N46 770 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 TYRO3Q06418 890 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 TLDC2A0PJX2 215 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 GMNNO75496 209 aa13.19□□□□□ -0.3
SHPRH-211ENST00000629427 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
SHPRH-211ENST00000629427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 UBLCP1Q8WVY7 318 aaPredicted RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 B4E1Z4 1266 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 INF2Q27J81 1249 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 NAP1L4Q99733 375 aaKnown RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 IFNKQ9P0W0 207 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 RPRD2Q5VT52 1461 aaKnown RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 ITGA6P23229 1130 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 RNMTO43148 476 aaKnown RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 TCP10Q12799 353 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 USH1GQ495M9 461 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 PFDN4Q9NQP4 134 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 FLT4P35916 1363 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
SHPRH-211ENST00000629427 AATFQ9NY61 560 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHPRH-211ENST00000629427 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 GCP02774 474 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 MNAT1P51948 309 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 FMNL3Q8IVF7 1028 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 GTPBP4Q9BZE4 634 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 BIRC2Q13490 618 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 FAM204AQ9H8W3 233 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 ZEB2O60315 1214 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
SHPRH-211ENST00000629427 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
SHPRH-211ENST00000629427 SPOPO43791 374 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 UIMC1Q96RL1 719 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHPRH-211ENST00000629427 V9GYY5 206 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-211ENST00000629427 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 HSPA2P54652 639 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 TIMM10P62072 90 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 CEP85Q6P2H3 762 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 RHOXF2Q9BQY4 288 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 TBC1D31Q96DN5 1066 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 DYNC1I1O14576 645 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 TNFAIP3P21580 790 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHPRH-211ENST00000629427 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-211ENST00000629427 CPLX4Q7Z7G2 160 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 NPATQ14207 1427 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 A2MP01023 1474 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 PDE4DQ08499 809 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 CPXCR1Q8N123 301 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 CSRNP2Q9H175 543 aa13.16□□□□□ -0.3
SHPRH-211ENST00000629427 A0A1B0GVL5 298 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-211ENST00000629427 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
SHPRH-211ENST00000629427 NAP1L3Q99457 506 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms