RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GIMAP6Q6P9H5 292 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 OLFM4Q6UX06 510 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 PODNQ7Z5L7 613 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 LCORLQ8N3X6 602 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 MIGA1Q8NAN2 632 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 TTC14Q96N46 770 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 NEK1Q96PY6 1258 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 PSMD1Q99460 953 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 RIOK1Q9BRS2 568 aaKnown RBP8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 NOL10Q9BSC4 688 aaKnown RBP8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 NAPBQ9H115 298 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 VPS33BQ9H267 617 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 PIM2Q9P1W9 311 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 CD2APQ9Y5K6 639 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 SLC4A4Q9Y6R1 1079 aa8.96□□□□□ -0.98
PTP4A1-206ENST00000627002 GSG1L2A8MUP6 293 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 C21orf2O43822 256 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 BAG3O95817 575 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 TDO2P48775 406 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 FKBP1AP62942 108 aaKnown RBP8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 KIAA2012Q0VF49 1180 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 MFSD14BQ5SR56 506 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 IFNL3Q8IZI9 196 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 ZSCAN31Q96LW9 406 aaPredicted RBP8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 CRNKL1Q9BZJ0 848 aaKnown RBP8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 LIMCH1Q9UPQ0 1083 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 JAG2Q9Y219 1238 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 SNED1Q8TER0 1413 aa8.95□□□□□ -0.98
PTP4A1-206ENST00000627002 E7EWF7 191 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 PLCG2P16885 1265 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 AK2P54819 239 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 GTF2IP78347 998 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 TRDNQ13061 729 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 DOK7Q18PE1 504 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 DALRD3Q5D0E6 543 aaKnown RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 TTLL5Q6EMB2 1281 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 DHX32Q7L7V1 743 aaKnown RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 RALYLQ86SE5 291 aaKnown RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 ADGRA1Q86SQ6 560 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 ZNF384Q8TF68 577 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 FAM163AQ96GL9 167 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 TMX3Q96JJ7 454 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 EPB41L4AQ9HCS5 686 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 ATP8A2Q9NTI2 1148 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 TAF6LQ9Y6J9 622 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 MROH7-TTC4A0A0A0MT08 1334 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 MAST2Q6P0Q8 1798 aa8.94□□□□□ -0.98
PTP4A1-206ENST00000627002 PRKAB2O43741 272 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 ECE2O60344 883 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 PPP4CP60510 307 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 HAND2P61296 217 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 DYNLL1P63167 89 aaKnown RBP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 CUL4AQ13619 759 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 AOC3Q16853 763 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 STRIP1Q5VSL9 837 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 STOX1Q6ZVD7 989 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 INTS4Q96HW7 963 aaKnown RBP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 RNF41Q9H4P4 317 aaPredicted RBP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 CNNM2Q9H8M5 875 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 AATFQ9NY61 560 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 DLEC1Q9Y238 1755 aa8.93□□□□□ -0.98
PTP4A1-206ENST00000627002 MYH7P12883 1935 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 CACNA1SQ13698 1873 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 SLX4Q8IY92 1834 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 KIF13BQ9NQT8 1826 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 GPR75-ASB3A0A0A6YYF3 556 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 USP17L3A6NCW0 530 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 USP17L4A6NCW7 530 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 PPIP5K2O43314 1243 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 PCP11498 1178 aaKnown RBP8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 CPA1P15085 419 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 FGD1P98174 961 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 EXOSC10Q01780 885 aaKnown RBP8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 USP17L1Q7RTZ2 530 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 FBXL16Q8N461 479 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 SPRYD3Q8NCJ5 442 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 STAG1Q8WVM7 1258 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 CHMP4CQ96CF2 233 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 KRT23Q9C075 422 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 SLKQ9H2G2 1235 aaPredicted RBP8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 DBNDD1Q9H9R9 158 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 CHMP5Q9NZZ3 219 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 ANAPC4Q9UJX5 808 aa8.92□□□□□ -0.98
PTP4A1-206ENST00000627002 GAKO14976 1311 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 SLC3A2P08195 630 aaKnown RBP8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 MCM5P33992 734 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 DDIT3P35638 169 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 BTDP43251 543 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 USP5P45974 858 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 NT5C2P49902 561 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 PPARAQ07869 468 aa8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 TOB2Q14106 344 aaPredicted RBP8.91□□□□□ -0.98
PTP4A1-206ENST00000627002 DIXDC1Q155Q3 683 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms