RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 PPP1R1BQ9UD71 204 aaPredicted RBP6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CHMP4BP1P59074 171 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 TIMM10P62072 90 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 IRX3P78415 501 aaPredicted RBP6.37□□□□□ -1.39
ERCC6-213ENST00000624341 PPARDQ03181 441 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CPLX4Q7Z7G2 160 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CNGA4Q8IV77 575 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 SYCP3Q8IZU3 236 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 EYA1Q99502 592 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 ELP1O95163 1332 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 A0A1W2PP64 1363 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 MCM7P33993 719 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 HELBQ8NG08 1087 aaPredicted RBP6.37□□□□□ -1.39
ERCC6-213ENST00000624341 LRRC59Q96AG4 307 aaKnown RBP6.37□□□□□ -1.39
ERCC6-213ENST00000624341 SCLT1Q96NL6 688 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 SELENOOQ9BVL4 669 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 RAD50Q92878 1312 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 XIRP1Q702N8 1843 aaKnown RBP6.37□□□□□ -1.39
ERCC6-213ENST00000624341 TUBB4BP68371 445 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 TNIP1Q15025 636 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CFAP58Q5T655 872 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 ANO1Q5XXA6 986 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 SELENOSQ9BQE4 189 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 CABP5Q9NP86 173 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 PALD1Q9ULE6 856 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 MAPK8IP1Q9UQF2 711 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 NDUFB9Q9Y6M9 179 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 A0A1W2PRG0 241 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 TUBBP07437 444 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 LTKP29376 864 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 ATL3Q6DD88 541 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 SERPINA10Q9UK55 444 aa6.37□□□□□ -1.39
ERCC6-213ENST00000624341 PPIP5K1Q6PFW1 1433 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 TMEM131LA2VDJ0 1609 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 KRT13P13646 458 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 DESP17661 470 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ERCC6LQ2NKX8 1250 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 MIGA1Q8NAN2 632 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CUL5Q93034 780 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF215Q9UL58 517 aaPredicted RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 KCNH3Q9ULD8 1083 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 VWA3AA6NCI4 1184 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ZPR1O75312 459 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF202O95125 648 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 LONRF3Q496Y0 759 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 KRT28Q7Z3Y7 464 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 IQUBQ8NA54 791 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CDC5LQ99459 802 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CHD2O14647 1828 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 OAS2P29728 719 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF174Q15697 407 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CCDC6Q16204 474 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 AKAP4Q5JQC9 854 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 AFAP1L1Q8TED9 768 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 DBNDD2Q9BQY9 259 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CRNKL1Q9BZJ0 848 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 WDR70Q9NW82 654 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 A0A1B0GUL7 405 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 TBCAO75347 108 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 KIF4AO95239 1232 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 CD2BP2O95400 341 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 RNASE9P60153 205 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ZNF710Q8N1W2 664 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 ARFGAP2Q8N6H7 521 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 NAPGQ99747 312 aaPredicted RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 XPO4Q9C0E2 1151 aaKnown RBP6.36□□□□□ -1.39
ERCC6-213ENST00000624341 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 PHLPP1O60346 1717 aa6.36□□□□□ -1.39
ERCC6-213ENST00000624341 NDUFAB1O14561 156 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 HPDP32754 393 aaPredicted RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 MTX1Q13505 466 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ME3Q16798 604 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 RGS22Q8NE09 1264 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 HOMER2Q9NSB8 354 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TMOD2Q9NZR1 351 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NFE2L3Q9Y4A8 694 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ALKQ9UM73 1620 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 POLR2DO15514 142 aaKnown RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NEBLO76041 1014 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 BAG3O95817 575 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TSPY3P0CV98 308 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TSPY8P0CW00 308 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 KRT2P35908 639 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 GPIHBP1Q8IV16 184 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ANKS4BQ8N8V4 417 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NEK11Q8NG66 645 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 GDAP1L1Q96MZ0 367 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NSRP1Q9H0G5 558 aaKnown RBP6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TBX22Q9Y458 520 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ZFYVE9O95405 1425 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 ROBO1Q9Y6N7 1651 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TMEM94Q12767 1356 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 B4E1Z4 1266 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 C6orf229H3BNL8 230 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 NAPAP54920 295 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 TBC1D8BQ0IIM8 1120 aa6.35□□□□□ -1.39
ERCC6-213ENST00000624341 GBP6Q6ZN66 633 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms