RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 CDC45O75419 566 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 CHGBP05060 677 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 LDHCP07864 332 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 CYP7A1P22680 504 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 CHMLP26374 656 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 DIXDC1Q155Q3 683 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 ANGEL2Q5VTE6 544 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 HHIPL2Q6UWX4 724 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 MTMR14Q8NCE2 650 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 APPBP2Q92624 585 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 SERPINA10Q9UK55 444 aa23.92■■□□□ 1.42
PDLIM2-221ENST00000622702 GAKO14976 1311 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 ZMYM1Q5SVZ6 1142 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 CDC37L1Q7L3B6 337 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 USP48Q86UV5 1035 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 TEKT1Q969V4 418 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 ZBED3Q96IU2 234 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 DIAPH3Q9NSV4 1193 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 MROH7-TTC4A0A0A0MT08 1334 aa23.91■■□□□ 1.42
PDLIM2-221ENST00000622702 TRAF5O00463 557 aa23.9■■□□□ 1.42
PDLIM2-221ENST00000622702 CRKP46108 304 aa23.9■■□□□ 1.42
PDLIM2-221ENST00000622702 APLP1P51693 650 aa23.9■■□□□ 1.42
PDLIM2-221ENST00000622702 SLFNL1Q499Z3 407 aa23.9■■□□□ 1.42
PDLIM2-221ENST00000622702 FMR1Q06787 632 aaKnown RBP eCLIP23.89■■□□□ 1.42
PDLIM2-221ENST00000622702 KRT26Q7Z3Y9 468 aa23.89■■□□□ 1.42
PDLIM2-221ENST00000622702 ADGRA1Q86SQ6 560 aa23.89■■□□□ 1.42
PDLIM2-221ENST00000622702 PRMT6Q96LA8 375 aaPredicted RBP23.89■■□□□ 1.42
PDLIM2-221ENST00000622702 MYH2Q9UKX2 1941 aa23.89■■□□□ 1.42
PDLIM2-221ENST00000622702 SPDYE2BA6NHP3 402 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 SPDYE6P0CI01 402 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 NMIQ13287 307 aaPredicted RBP23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 SULF1Q8IWU6 871 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 FAM227BQ96M60 508 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 ZDHHC15Q96MV8 337 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 HELLSQ9NRZ9 838 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 DAGLAQ9Y4D2 1042 aa23.88■■□□□ 1.41
PDLIM2-221ENST00000622702 GPR75-ASB3A0A0A6YYF3 556 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 A0A0D9SFI3 127 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 ADM5C9JUS6 153 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 DLK2Q6UY11 383 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 OSBP2Q969R2 916 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 CEP350Q5VT06 3117 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 PITPNM2Q9BZ72 1349 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 MYO1BO43795 1136 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 PPP4CP60510 307 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 CASC1Q6TDU7 716 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 CWC27Q6UX04 472 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 PUS7LQ9H0K6 701 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 SCAF8Q9UPN6 1271 aaKnown RBP23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 ECM29Q5VYK3 1845 aa23.87■■□□□ 1.41
PDLIM2-221ENST00000622702 RUFY2Q8WXA3 655 aa23.86■■□□□ 1.41
PDLIM2-221ENST00000622702 RAD50Q92878 1312 aa23.86■■□□□ 1.41
PDLIM2-221ENST00000622702 BAG3O95817 575 aa23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 HTRA3P83110 453 aa23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 MCMDC2Q4G0Z9 681 aa23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 APOBEC3HQ6NTF7 200 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 CERS3Q8IU89 383 aa23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 SEC62Q99442 399 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 RIOK1Q9BRS2 568 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-221ENST00000622702 TRPM7Q96QT4 1865 aa23.84■■□□□ 1.41
PDLIM2-221ENST00000622702 CLRN2A0PK11 232 aa23.84■■□□□ 1.41
PDLIM2-221ENST00000622702 BTDP43251 543 aa23.84■■□□□ 1.41
PDLIM2-221ENST00000622702 MIGA1Q8NAN2 632 aa23.84■■□□□ 1.41
PDLIM2-221ENST00000622702 NOL10Q9BSC4 688 aaKnown RBP23.84■■□□□ 1.41
PDLIM2-221ENST00000622702 MAGEB6P1A0A0J9YX57 407 aa23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 M0R2C6 588 aa23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 APOBEC3FQ8IUX4 373 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 ESYT1Q9BSJ8 1104 aa23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 TDRD3Q9H7E2 651 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 AATFQ9NY61 560 aaKnown RBP eCLIP23.83■■□□□ 1.41
PDLIM2-221ENST00000622702 TMEM88BA6NKF7 163 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 SGSM2O43147 1006 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 GPAA1O43292 621 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 MBD4O95243 580 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 AIDAQ96BJ3 306 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 ZNF408Q9H9D4 720 aa23.82■■□□□ 1.4
PDLIM2-221ENST00000622702 PLCG2P16885 1265 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 RHBDL3P58872 404 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 DYNLL1P63167 89 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 CST9Q5W186 159 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 IL25Q9H293 177 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 VEZTQ9HBM0 779 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 CELF2O95319 508 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 SPDYE2Q495Y8 402 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 CCDC171Q6TFL3 1326 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 ZNF589Q86UQ0 364 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 LCORLQ8N3X6 602 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 CDCA5Q96FF9 252 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 STRBPQ96SI9 672 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 ARMT1Q9H993 441 aa23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 ZNF70Q9UC06 446 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-221ENST00000622702 MFAP1P55081 439 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-221ENST00000622702 C8orf34Q49A92 452 aa23.8■■□□□ 1.4
PDLIM2-221ENST00000622702 CDC42EP5Q6NZY7 148 aa23.8■■□□□ 1.4
PDLIM2-221ENST00000622702 PRAMEF18Q5VWM3 479 aa23.79■■□□□ 1.4
PDLIM2-221ENST00000622702 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
PDLIM2-221ENST00000622702 GNAT2P19087 354 aa23.78■■□□□ 1.4
PDLIM2-221ENST00000622702 SH3RF3Q8TEJ3 882 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms