RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SEMA3EO15041 775 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 FLOT1O75955 427 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 BAG4O95429 457 aaKnown RBP10.54□□□□□ -0.72
HDAC9-229ENST00000622668 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
HDAC9-229ENST00000622668 PARP1P09874 1014 aaKnown RBP10.54□□□□□ -0.72
HDAC9-229ENST00000622668 RXRAP19793 462 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 ZNF827Q17R98 1081 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 SLC5A4Q9NY91 659 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 PKD2L1Q9P0L9 805 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 ATP6V0A2Q9Y487 856 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 MYO3BQ8WXR4 1341 aa10.54□□□□□ -0.72
HDAC9-229ENST00000622668 RAB34Q9BZG1 259 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 SPC25Q9HBM1 224 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 BACH1O14867 736 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 HUNKP57058 714 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 RASSF7Q02833 373 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 ICA1Q05084 483 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 BMP2KLQ5H9B9 411 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 FAM47AQ5JRC9 791 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
HDAC9-229ENST00000622668 NCAPG2Q86XI2 1143 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 SPICE1Q8N0Z3 855 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 PAF1Q8N7H5 531 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 RRP36Q96EU6 259 aaKnown RBP10.53□□□□□ -0.72
HDAC9-229ENST00000622668 ISCA1Q9BUE6 129 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 GDF11O95390 407 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 SSH3Q8TE77 659 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 GINS2Q9Y248 185 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 MEGF6O75095 1541 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 ABCC4O15439 1325 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 VWDEQ8N2E2 1590 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 PTMSP20962 102 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
HDAC9-229ENST00000622668 ABCB5Q2M3G0 1257 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 CCDC174Q6PII3 467 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 DPP9Q86TI2 863 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 WRNIP1Q96S55 665 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 CD2APQ9Y5K6 639 aa10.53□□□□□ -0.72
HDAC9-229ENST00000622668 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 SCAF8Q9UPN6 1271 aaKnown RBP10.52□□□□□ -0.73
HDAC9-229ENST00000622668 UBA5Q9GZZ9 404 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 KINO60870 393 aaKnown RBP10.52□□□□□ -0.73
HDAC9-229ENST00000622668 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-229ENST00000622668 CRKP46108 304 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 ZNF157P51786 506 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-229ENST00000622668 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 USH1GQ495M9 461 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 EPHA10Q5JZY3 1008 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 STYK1Q6J9G0 422 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-229ENST00000622668 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
HDAC9-229ENST00000622668 CALM1P0DP23 149 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 CALM2P0DP24 149 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 CALM3P0DP25 149 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 ANKRD35Q8N283 1001 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 FAM227BQ96M60 508 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 ALAS1P13196 640 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 CCNA1P78396 465 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 SYT17Q9BSW7 474 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 GGA3Q9NZ52 723 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 ZBTB21Q9ULJ3 1066 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 DDNO94850 711 aaPredicted RBP10.51□□□□□ -0.73
HDAC9-229ENST00000622668 ATP5JP18859 108 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 PRDX5P30044 214 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 PTPN12Q05209 780 aaKnown RBP10.51□□□□□ -0.73
HDAC9-229ENST00000622668 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 IPO9Q96P70 1041 aaKnown RBP10.51□□□□□ -0.73
HDAC9-229ENST00000622668 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 FAM13BQ9NYF5 915 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 SERPINB13Q9UIV8 391 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 TNS2Q63HR2 1409 aa10.51□□□□□ -0.73
HDAC9-229ENST00000622668 CIAO1O76071 339 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 CELF2O95319 508 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 CFBP00751 764 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ZNF34Q8IZ26 560 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 CHURC1Q8WUH1 139 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 RRAGCQ9HB90 399 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 OFD1O75665 1012 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ANGEL2Q5VTE6 544 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 APOBEC3FQ8IUX4 373 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 CCDC148Q8NFR7 591 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ARPP21Q9UBL0 812 aaPredicted RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 DBNLQ9UJU6 430 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 DYNLL1P63167 89 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 LRRC47Q8N1G4 583 aaKnown RBP10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 ADCY9O60503 1353 aa10.5□□□□□ -0.73
HDAC9-229ENST00000622668 TPM1P09493 284 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms