RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SLC3A2P08195 630 aaKnown RBP11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 GPTP24298 496 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 LIFRP42702 1097 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 PHKA1P46020 1223 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 PUM3Q15397 648 aaKnown RBP11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 NTRK3Q16288 839 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 KRT40Q6A162 431 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 APOA5Q6Q788 366 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 MTA3Q9BTC8 594 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 CICQ96RK0 1608 aaPredicted RBP11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 IKBKBO14920 756 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 TNNT1P13805 278 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 SLC5A1P13866 664 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 PFKFB1P16118 471 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 U2AF2P26368 475 aaKnown RBP eCLIP11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCZ1BP86790 482 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCZ1P86791 482 aaPredicted RBP11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 PTPAQ15257 358 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 ELOA2Q8IYF1 753 aaPredicted RBP11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 TSC1Q92574 1164 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 LY9Q9HBG7 655 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 WWC3Q9ULE0 1092 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZBTB1Q9Y2K1 713 aa11.15□□□□□ -0.62
IGHV3-54-201ENST00000622166 RTL9Q8NET4 1388 aa11.15□□□□□ -0.63
IGHV3-54-201ENST00000622166 SLIT2O94813 1529 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 ZBTB43O43298 467 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 CUTAO60888 179 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 IDH1O75874 414 aaKnown RBP11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 CDC27P30260 824 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 KCNJ6P48051 423 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 TPM4P67936 248 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 TPD52L1Q16890 204 aaPredicted RBP11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 NYAP1Q6ZVC0 841 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 NBPF11Q86T75 865 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 CNNM2Q9H8M5 875 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 PHLPP1O60346 1717 aa11.14□□□□□ -0.63
IGHV3-54-201ENST00000622166 COL22A1Q8NFW1 1626 aaPredicted RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 A0A087WWV3 80 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 B4E1Z4 1266 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 KIF2AO00139 706 aaPredicted RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 MYO1BO43795 1136 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 APPP05067 770 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 SKILP12757 684 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 GNAT2P19087 354 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 RCAN1P53805 252 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 MAP3K12Q12852 859 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 NCAPHQ15003 741 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 DPCR1Q3MIW9 517 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 RESP18Q5W5W9 173 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 VPS37DQ86XT2 251 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 SPATA5Q8NB90 893 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 CCDC150Q8NCX0 1101 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 WASF1Q92558 559 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 AIDAQ96BJ3 306 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 KRT23Q9C075 422 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
IGHV3-54-201ENST00000622166 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 MROH7-TTC4A0A0A0MT08 1334 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 GSG1L2A8MUP6 293 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 RANBP6O60518 1105 aaKnown RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 IFNAR1P17181 557 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 SYKP43405 635 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 SSRP1Q08945 709 aaKnown RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 TRIM29Q14134 588 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 TMEM67Q5HYA8 995 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 AKNAD1Q5T1N1 836 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 CEP135Q66GS9 1140 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 CCAR2Q8N163 923 aaKnown RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 C16orf45Q96MC5 204 aaPredicted RBP11.12□□□□□ -0.63
IGHV3-54-201ENST00000622166 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms