RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 RPS6KL1Q9Y6S9 549 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
VPS11-207ENST00000620429 MCM6Q14566 821 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 LARP1BQ659C4 914 aaKnown RBP11.88□□□□□ -0.51
VPS11-207ENST00000620429 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 AMOTL1Q8IY63 956 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 SPATS2LQ9NUQ6 558 aaKnown RBP11.88□□□□□ -0.51
VPS11-207ENST00000620429 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
VPS11-207ENST00000620429 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
VPS11-207ENST00000620429 COQ9O75208 318 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 SFPQP23246 707 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS11-207ENST00000620429 INPP5BP32019 993 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 PTH1RQ03431 593 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 FAM173BQ6P4H8 233 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 KCNB2Q92953 911 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 BAG1Q99933 345 aaPredicted RBP11.87□□□□□ -0.51
VPS11-207ENST00000620429 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 BRWD3Q6RI45 1802 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 GOLGA6L4A6NEF3 574 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 EBAG9O00559 213 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 SHOX2O60902 331 aaPredicted RBP11.87□□□□□ -0.51
VPS11-207ENST00000620429 ERLIN1O75477 346 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 MYBL2P10244 700 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 CCNHP51946 323 aaPredicted RBP11.87□□□□□ -0.51
VPS11-207ENST00000620429 ME3Q16798 604 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
VPS11-207ENST00000620429 FAM204AQ9H8W3 233 aa11.87□□□□□ -0.51
VPS11-207ENST00000620429 EIF4A1P60842 406 aaKnown RBP11.86□□□□□ -0.51
VPS11-207ENST00000620429 STX1AQ16623 288 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
VPS11-207ENST00000620429 A0A1B0GUA9 196 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 FNTAP49354 379 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 ST3GAL1Q11201 340 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 POLA2Q14181 598 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 FCHSD1Q86WN1 690 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 IQCA1Q86XH1 822 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 DHX40Q8IX18 779 aaKnown RBP11.86□□□□□ -0.51
VPS11-207ENST00000620429 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
VPS11-207ENST00000620429 BECN2A8MW95 431 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 VPS72Q15906 364 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 ISM2Q6H9L7 571 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 AFAP1L1Q8TED9 768 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
VPS11-207ENST00000620429 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 FSBPO95073 299 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 NEFHP12036 1026 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 TUBB4BP68371 445 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 ZNF513Q8N8E2 541 aaPredicted RBP11.85□□□□□ -0.51
VPS11-207ENST00000620429 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
VPS11-207ENST00000620429 ALS2Q96Q42 1657 aa11.85□□□□□ -0.51
VPS11-207ENST00000620429 DISP2A7MBM2 1401 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 PRAMEF22A3QJZ6 481 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 BTBD11A6QL63 1104 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
VPS11-207ENST00000620429 ZKSCAN1P17029 563 aaPredicted RBP11.84□□□□□ -0.51
VPS11-207ENST00000620429 TEFQ10587 303 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 MTA1Q13330 715 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
VPS11-207ENST00000620429 CAND2O75155 1236 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 NR1I2O75469 434 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 RBM5P52756 815 aaKnown RBP eCLIP11.84□□□□□ -0.51
VPS11-207ENST00000620429 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 CEP112Q8N8E3 955 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
VPS11-207ENST00000620429 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.51
VPS11-207ENST00000620429 SLIT3O75094 1523 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS11-207ENST00000620429 SPATA32Q96LK8 384 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 ANKZF1Q9H8Y5 726 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 CD248Q9HCU0 757 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 CPSF2Q9P2I0 782 aaKnown RBP11.83□□□□□ -0.52
VPS11-207ENST00000620429 RNMTO43148 476 aaKnown RBP11.83□□□□□ -0.52
VPS11-207ENST00000620429 ZSCAN12O43309 604 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
VPS11-207ENST00000620429 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
VPS11-207ENST00000620429 PDCP20941 246 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 CASP8Q14790 479 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 RBBP5Q15291 538 aaKnown RBP11.83□□□□□ -0.52
VPS11-207ENST00000620429 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 GBP3Q9H0R5 595 aa11.83□□□□□ -0.52
VPS11-207ENST00000620429 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 CCT5P48643 541 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 SLC5A9Q2M3M2 681 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms