RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 HPS5Q9UPZ3 1129 aa22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 RTCBQ9Y3I0 505 aaKnown RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 NEDD4P46934 1319 aa22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 HMGN5P82970 282 aaKnown RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 SCAND2PQ9GZW5 306 aaPredicted RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 SLC4A4Q9Y6R1 1079 aa22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 SMIM22K7EJ46 135 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 RPS6KA4O75676 772 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 ADD1P35611 737 aaKnown RBP22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 ZKSCAN3Q9BRR0 538 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 DACT1Q9NYF0 836 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 NARFQ9UHQ1 456 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 CKAP2LQ8IYA6 745 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 BICD2Q8TD16 824 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 SDR42E1Q8WUS8 393 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 PGBD1Q96JS3 809 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 GSG1L2A8MUP6 293 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 CYP7A1P22680 504 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 U2AF2P26368 475 aaKnown RBP eCLIP22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 TDO2P48775 406 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 PLCB2Q00722 1185 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 MICU3Q86XE3 530 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 NLRP3Q96P20 1036 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 TACC3Q9Y6A5 838 aa22.61■■□□□ 1.21
LAPTM4B-204ENST00000619747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.61■■□□□ 1.219e-8■□□□□ 10.7
LAPTM4B-204ENST00000619747 SF3B3Q15393 1217 aaKnown RBP22.6■■□□□ 1.21
LAPTM4B-204ENST00000619747 CARMIL3Q8ND23 1372 aa22.6■■□□□ 1.21
LAPTM4B-204ENST00000619747 CNTNAP4Q9C0A0 1308 aa22.6■■□□□ 1.21
LAPTM4B-204ENST00000619747 POLR3DP05423 398 aaPredicted RBP22.6■■□□□ 1.21
LAPTM4B-204ENST00000619747 BSDC1Q9NW68 430 aaPredicted RBP22.6■■□□□ 1.21
LAPTM4B-204ENST00000619747 PDCL2Q8N4E4 241 aa22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 AIFM3Q96NN9 605 aa22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 ORC3Q9UBD5 711 aaPredicted RBP22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 SALL1Q9NSC2 1324 aa22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 NFXL1Q6ZNB6 911 aa22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 GJD4Q96KN9 370 aaPredicted RBP22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 KIF3AQ9Y496 699 aa22.59■■□□□ 1.21
LAPTM4B-204ENST00000619747 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
LAPTM4B-204ENST00000619747 PRIMPOLQ96LW4 560 aa22.58■■□□□ 1.21
LAPTM4B-204ENST00000619747 ZSWIM5Q9P217 1185 aa22.58■■□□□ 1.21
LAPTM4B-204ENST00000619747 ANGEL1Q9UNK9 670 aaKnown RBP22.58■■□□□ 1.21
LAPTM4B-204ENST00000619747 IRX5P78411 483 aaPredicted RBP22.58■■□□□ 1.2
LAPTM4B-204ENST00000619747 USP28Q96RU2 1077 aa22.58■■□□□ 1.2
LAPTM4B-204ENST00000619747 ZSCAN16Q9H4T2 348 aaPredicted RBP22.58■■□□□ 1.2
LAPTM4B-204ENST00000619747 MINDY4BA8MYZ0 360 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 NR1I2O75469 434 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 CAVIN4Q5BKX8 364 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 PHKBQ93100 1093 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 FAM84BQ96KN1 310 aaPredicted RBP22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 RFC4P35249 363 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 TPTE2Q6XPS3 522 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 RTL9Q8NET4 1388 aa22.57■■□□□ 1.2
LAPTM4B-204ENST00000619747 GTF2F1P35269 517 aaKnown RBP eCLIP22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 EVCP57679 992 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 NAA16Q6N069 864 aaPredicted RBP22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 LRP5O75197 1615 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 UBE2Q2LH0YL09 131 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 C17orf53Q8N3J3 647 aaPredicted RBP22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 C8orf76Q96K31 380 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 USP25Q9UHP3 1055 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 ELP1O95163 1332 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 AFF2P51816 1311 aa22.56■■□□□ 1.2
LAPTM4B-204ENST00000619747 HSPA1LP34931 641 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 CHAF1AQ13111 956 aaPredicted RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 TMEM67Q5HYA8 995 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 ILDR1Q86SU0 546 aaPredicted RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 CCDC82Q8N4S0 544 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 ATRNO75882 1429 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 NUP62CLQ9H1M0 184 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 GNL3LQ9NVN8 582 aaKnown RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 CFAP45Q9UL16 551 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 COL5A3P25940 1745 aaPredicted RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 CDC27P30260 824 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 METAP2P50579 478 aaKnown RBP eCLIP22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 TXNRD3Q86VQ6 643 aa22.55■■□□□ 1.2
LAPTM4B-204ENST00000619747 SH2B2O14492 632 aaPredicted RBP22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 DHX16O60231 1041 aaKnown RBP22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 UBE4AQ14139 1066 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 SEPT12Q8IYM1 358 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 FBXL16Q8N461 479 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 CYP2D7A0A087X1C5 515 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 APOA5Q6Q788 366 aa22.54■■□□□ 1.2
LAPTM4B-204ENST00000619747 IGDCC4Q8TDY8 1250 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 TNMDQ9H2S6 317 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 RREB1Q92766 1687 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 AKNAD1Q5T1N1 836 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 TRAPPC3LQ5T215 181 aa22.53■■□□□ 1.2
LAPTM4B-204ENST00000619747 SLC4A8Q2Y0W8 1093 aa22.52■■□□□ 1.2
LAPTM4B-204ENST00000619747 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms