RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 NIP7Q9Y221 180 aaKnown RBP eCLIP34.92■■■■□ 3.18
KHSRP-213ENST00000619396 RALYLQ86SE5 291 aaKnown RBP34.91■■■■□ 3.18
KHSRP-213ENST00000619396 AOPEPQ8N6M6 819 aa34.91■■■■□ 3.18
KHSRP-213ENST00000619396 GJB4Q9NTQ9 266 aa34.91■■■■□ 3.18
KHSRP-213ENST00000619396 SMTNL1A8MU46 457 aa34.91■■■■□ 3.18
KHSRP-213ENST00000619396 SPTLC2O15270 562 aa34.91■■■■□ 3.18
KHSRP-213ENST00000619396 NAT10Q9H0A0 1025 aaKnown RBP34.91■■■■□ 3.18
KHSRP-213ENST00000619396 DENND2AQ9ULE3 1009 aa34.91■■■■□ 3.18
KHSRP-213ENST00000619396 KIF28PB7ZC32 967 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 ARID4AP29374 1257 aaPredicted RBP34.9■■■■□ 3.18
KHSRP-213ENST00000619396 RAB11FIP4Q86YS3 637 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 LPIN2Q92539 896 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 KIAA1468Q9P260 1216 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 MROH5Q6ZUA9 1318 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 SF3A1Q15459 793 aaKnown RBP34.9■■■■□ 3.18
KHSRP-213ENST00000619396 RGS22Q8NE09 1264 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 NKX2-3Q8TAU0 364 aa34.9■■■■□ 3.18
KHSRP-213ENST00000619396 ZNF532Q9HCE3 1301 aa34.89■■■■□ 3.18
KHSRP-213ENST00000619396 RREB1Q92766 1687 aa34.89■■■■□ 3.18
KHSRP-213ENST00000619396 CPLX1O14810 134 aa34.89■■■■□ 3.18
KHSRP-213ENST00000619396 TPD52L1Q16890 204 aaPredicted RBP34.89■■■■□ 3.18
KHSRP-213ENST00000619396 FAM98CQ17RN3 349 aaKnown RBP34.89■■■■□ 3.18
KHSRP-213ENST00000619396 SMIM5Q71RC9 77 aa34.89■■■■□ 3.18
KHSRP-213ENST00000619396 MPHOSPH8Q99549 860 aa34.89■■■■□ 3.18
KHSRP-213ENST00000619396 NTSR2O95665 410 aa34.88■■■■□ 3.17
KHSRP-213ENST00000619396 KIF23Q02241 960 aaPredicted RBP34.88■■■■□ 3.17
KHSRP-213ENST00000619396 BARGINQ6ZT62 677 aa34.88■■■■□ 3.17
KHSRP-213ENST00000619396 C4AP0C0L4 1744 aa34.88■■■■□ 3.17
KHSRP-213ENST00000619396 C4BP0C0L5 1744 aa34.88■■■■□ 3.17
KHSRP-213ENST00000619396 PAXBP1Q9Y5B6 917 aa34.87■■■■□ 3.17
KHSRP-213ENST00000619396 COL4A1P02462 1669 aa34.87■■■■□ 3.17
KHSRP-213ENST00000619396 AXDND1Q5T1B0 1012 aaPredicted RBP34.87■■■■□ 3.17
KHSRP-213ENST00000619396 AK7Q96M32 723 aa34.87■■■■□ 3.17
KHSRP-213ENST00000619396 BPIFA3Q9BQP9 254 aa34.87■■■■□ 3.17
KHSRP-213ENST00000619396 PDE6AP16499 860 aa34.86■■■■□ 3.17
KHSRP-213ENST00000619396 TTF1Q15361 905 aaPredicted RBP34.86■■■■□ 3.17
KHSRP-213ENST00000619396 CCZ1BP86790 482 aa34.86■■■■□ 3.17
KHSRP-213ENST00000619396 CCZ1P86791 482 aaPredicted RBP34.86■■■■□ 3.17
KHSRP-213ENST00000619396 ANO1Q5XXA6 986 aa34.86■■■■□ 3.17
KHSRP-213ENST00000619396 ATRNO75882 1429 aa34.85■■■■□ 3.17
KHSRP-213ENST00000619396 SKILP12757 684 aa34.85■■■■□ 3.17
KHSRP-213ENST00000619396 RASGRF1Q13972 1273 aa34.85■■■■□ 3.17
KHSRP-213ENST00000619396 DPCR1Q3MIW9 517 aa34.85■■■■□ 3.17
KHSRP-213ENST00000619396 PTF1AQ7RTS3 328 aa34.85■■■■□ 3.17
KHSRP-213ENST00000619396 ARAP2Q8WZ64 1704 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 TCRBV5S4A2TA0A5A2 114 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 CCDC69A6NI79 296 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 UQCRFS1P1P0C7P4 283 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 PARP10Q53GL7 1025 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 SYNE3Q6ZMZ3 975 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 NBPF11Q86T75 865 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 TBC1D10CQ8IV04 446 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 FBXW7Q969H0 707 aa34.84■■■■□ 3.17
KHSRP-213ENST00000619396 SLC5A1P13866 664 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 SYCP1Q15431 976 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 CYB5R4Q7L1T6 521 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 SPATA5Q8NB90 893 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 ZMYM6O95789 1325 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 USP27XA6NNY8 438 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 ZNF202O95125 648 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 APPP05067 770 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 UBE3CQ15386 1083 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 PPP4R3BQ5MIZ7 849 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 FILIP1Q7Z7B0 1213 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 PDCL2Q8N4E4 241 aa34.83■■■■□ 3.17
KHSRP-213ENST00000619396 ANGEL1Q9UNK9 670 aaKnown RBP34.83■■■■□ 3.17
KHSRP-213ENST00000619396 CMA1P23946 247 aa34.82■■■■□ 3.17
KHSRP-213ENST00000619396 LINC00116Q8NCU8 138 aa34.82■■■■□ 3.17
KHSRP-213ENST00000619396 CCDC152Q4G0S7 254 aa34.82■■■■□ 3.16
KHSRP-213ENST00000619396 SH2B2O14492 632 aaPredicted RBP34.81■■■■□ 3.16
KHSRP-213ENST00000619396 BCAMP50895 628 aa34.81■■■■□ 3.16
KHSRP-213ENST00000619396 TRDNQ13061 729 aa34.81■■■■□ 3.16
KHSRP-213ENST00000619396 SMAP1Q8IYB5 467 aaPredicted RBP34.81■■■■□ 3.16
KHSRP-213ENST00000619396 NCBP1Q09161 790 aaKnown RBP34.81■■■■□ 3.16
KHSRP-213ENST00000619396 SLC39A14Q15043 492 aa34.81■■■■□ 3.16
KHSRP-213ENST00000619396 NYAP1Q6ZVC0 841 aa34.81■■■■□ 3.16
KHSRP-213ENST00000619396 OSBPL5Q9H0X9 879 aaPredicted RBP34.81■■■■□ 3.16
KHSRP-213ENST00000619396 KCND1Q9NSA2 647 aa34.81■■■■□ 3.16
KHSRP-213ENST00000619396 WDHD1O75717 1129 aaPredicted RBP34.8■■■■□ 3.16
KHSRP-213ENST00000619396 SLC3A2P08195 630 aaKnown RBP34.8■■■■□ 3.16
KHSRP-213ENST00000619396 CEP135Q66GS9 1140 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 C3orf67Q6ZVT6 689 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 PFKFB1P16118 471 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 NLRP12P59046 1061 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 MAGEB6Q8N7X4 407 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 AIFM3Q96NN9 605 aa34.79■■■■□ 3.16
KHSRP-213ENST00000619396 COL5A3P25940 1745 aaPredicted RBP34.79■■■■□ 3.16
KHSRP-213ENST00000619396 C8orf37Q96NL8 207 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 INCENPQ9NQS7 918 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 IMPACTQ9P2X3 320 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 TAF1P21675 1872 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 WTIPA6NIX2 430 aaPredicted RBP34.78■■■■□ 3.16
KHSRP-213ENST00000619396 IGHMBP2P38935 993 aaKnown RBP34.78■■■■□ 3.16
KHSRP-213ENST00000619396 GSDMDP57764 484 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 ALG1Q9BT22 464 aa34.78■■■■□ 3.16
KHSRP-213ENST00000619396 METAP2P50579 478 aaKnown RBP eCLIP34.77■■■■□ 3.161e-8■□□□□ 9.2
KHSRP-213ENST00000619396 CCDC112Q8NEF3 446 aa34.77■■■■□ 3.16
KHSRP-213ENST00000619396 SMARCC1Q92922 1105 aaPredicted RBP34.77■■■■□ 3.16
KHSRP-213ENST00000619396 STRBPQ96SI9 672 aaKnown RBP34.77■■■■□ 3.16
KHSRP-213ENST00000619396 MROH7-TTC4A0A0A0MT08 1334 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms