RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 RTN1Q16799 776 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CFAP221Q4G0U5 840 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 LRRC2Q9BYS8 371 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TMED1Q13445 227 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 KRT23Q9C075 422 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PPP1R9AQ9ULJ8 1098 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PTPRGP23470 1445 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 ERCC5P28715 1186 aaPredicted RBP18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PDCD2Q16342 344 aaPredicted RBP18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 ARMC9Q7Z3E5 817 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 MYD88Q99836 296 aa18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 MCM7P33993 719 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 IFIT5Q13325 482 aaKnown RBP18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PDCD7Q8N8D1 485 aaKnown RBP18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SLC5A1P13866 664 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SATB2Q9UPW6 733 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NUP58Q9BVL2 599 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 HOMER3Q9NSC5 361 aa18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CCT6AP40227 531 aaKnown RBP18.33■□□□□ 0.53
CNTNAP3B-214ENST00000618777 UAP1Q16222 522 aaPredicted RBP18.33■□□□□ 0.53
CNTNAP3B-214ENST00000618777 A0A1B0GVL5 298 aa18.33■□□□□ 0.53
CNTNAP3B-214ENST00000618777 I3L4J1 428 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TROVE2P10155 538 aaKnown RBP eCLIP18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PDE4BQ07343 736 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 YIPF3Q9GZM5 350 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CNNM2Q9H8M5 875 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SCOCQ9UIL1 159 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TMEM63CQ9P1W3 806 aa18.33■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 APBA1Q02410 837 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 USP6NLQ92738 828 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 HAUS1Q96CS2 278 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ZRANB1Q9UGI0 708 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ETF1P62495 437 aaKnown RBP18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 LEO1Q8WVC0 666 aaPredicted RBP18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 GUCY2CP25092 1073 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 STX2P32856 288 aa18.32■□□□□ 0.52
CNTNAP3B-214ENST00000618777 DENND2CQ68D51 928 aa18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 MLKLQ8NB16 471 aa18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SAR1BQ9Y6B6 198 aa18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 MCMDC2Q4G0Z9 681 aa18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RGS16O15492 202 aaPredicted RBP18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 NOC4LQ9BVI4 516 aaKnown RBP18.31■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SLC9C1Q4G0N8 1177 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 IFT88Q13099 833 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SPDL1Q96EA4 605 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ACTR5Q9H9F9 607 aaPredicted RBP18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ZC4H2Q9NQZ6 224 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ZSCAN20P17040 1043 aaPredicted RBP18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RABGGTAQ92696 567 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 XAB2Q9HCS7 855 aaKnown RBP18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CTNNA1P35221 906 aaKnown RBP18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TAF11Q15544 211 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TRIM31Q9BZY9 425 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 VPS16Q9H269 839 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RTEL1-TNFRSF6BF6WH68 1400 aa18.3■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RNF8O76064 485 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 KLHL7Q8IXQ5 586 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 GNAQP50148 359 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 LRRC43Q8N309 656 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SPOPO43791 374 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ATF3P18847 181 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CALML3P27482 149 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 KRT9P35527 623 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 NLRP12P59046 1061 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RNASE9P60153 205 aaKnown RBP18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PARP2Q9UGN5 583 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PAIP2BQ9ULR5 123 aaKnown RBP18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 HS2ST1Q7LGA3 356 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 ATP1A2P50993 1020 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TMCO4Q5TGY1 634 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 GDAP1L1Q96MZ0 367 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 TMOD2Q9NZR1 351 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PYCARDQ9ULZ3 195 aa18.29■□□□□ 0.52
CNTNAP3B-214ENST00000618777 MAGEA1P43355 309 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 AFAP1L2Q8N4X5 818 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 CCDC51Q96ER9 411 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 RAB17Q9H0T7 212 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 KRT15P19012 456 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 IMPG2Q9BZV3 1241 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SPECC1L-ADORA2AF8WAN1 911 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 PPP1R12AO14974 1030 aaPredicted RBP18.28■□□□□ 0.52
CNTNAP3B-214ENST00000618777 SEC31AO94979 1220 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms