RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SPTLC2O15270 562 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 GTF2IP78347 998 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 SPATA31A1Q5TZJ5 1347 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 ISCA1Q9BUE6 129 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
CIITA-213ENST00000618327 STX1AQ16623 288 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 RRP36Q96EU6 259 aaKnown RBP15.93■□□□□ 0.14
CIITA-213ENST00000618327 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 TRIM75PA6NK02 468 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 FGAP02671 866 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 VPS72Q15906 364 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 TMEM132AQ24JP5 1023 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 IFNL3Q8IZI9 196 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 PYM1Q9BRP8 204 aaKnown RBP15.93■□□□□ 0.14
CIITA-213ENST00000618327 ANTXR1Q9H6X2 564 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 ZNHIT6Q9NWK9 470 aaKnown RBP15.93■□□□□ 0.14
CIITA-213ENST00000618327 TRAF1Q13077 416 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 KANK3Q6NY19 840 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 CALML4Q96GE6 196 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 ATP10DQ9P241 1426 aa15.93■□□□□ 0.14
CIITA-213ENST00000618327 XDHP47989 1333 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 ZNF165P49910 485 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 MAPKAPK5Q8IW41 473 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 COL15A1P39059 1388 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 TGFBRAP1Q8WUH2 860 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 C6orf50Q9HD87 102 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 CCP110O43303 1012 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 PPARAQ07869 468 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 LRSAM1Q6UWE0 723 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 SYNE4Q8N205 404 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 USP25Q9UHP3 1055 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 KRT2P35908 639 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 ME3Q16798 604 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 RASEFQ8IZ41 740 aa15.92■□□□□ 0.14
CIITA-213ENST00000618327 ESPNB1AK53 854 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 USP17L21D6R901 530 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 RRP9O43818 475 aaKnown RBP15.91■□□□□ 0.14
CIITA-213ENST00000618327 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
CIITA-213ENST00000618327 UBR1Q8IWV7 1749 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 CAVIN2O95810 425 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 TRIM28Q13263 835 aaKnown RBP15.91■□□□□ 0.14
CIITA-213ENST00000618327 PI16Q6UXB8 463 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
CIITA-213ENST00000618327 CDHR2Q9BYE9 1310 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 SEMA3EO15041 775 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 DEXIO95424 95 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
CIITA-213ENST00000618327 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
CIITA-213ENST00000618327 DTNBO60941 627 aa15.9■□□□□ 0.14
CIITA-213ENST00000618327 ATL3Q6DD88 541 aa15.9■□□□□ 0.14
CIITA-213ENST00000618327 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
CIITA-213ENST00000618327 PPIP5K2O43314 1243 aa15.9■□□□□ 0.14
CIITA-213ENST00000618327 BBOX1O75936 387 aa15.9■□□□□ 0.14
CIITA-213ENST00000618327 ERCC4Q92889 916 aaPredicted RBP15.9■□□□□ 0.14
CIITA-213ENST00000618327 TTF2Q9UNY4 1162 aaKnown RBP15.9■□□□□ 0.14
CIITA-213ENST00000618327 AMPD3Q01432 767 aa15.89■□□□□ 0.14
CIITA-213ENST00000618327 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.14
CIITA-213ENST00000618327 CNKSR1Q969H4 720 aa15.89■□□□□ 0.14
CIITA-213ENST00000618327 GNA11P29992 359 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 JAK2O60674 1132 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 TNNI2P48788 182 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 WDR78Q5VTH9 848 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 ISM2Q6H9L7 571 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
CIITA-213ENST00000618327 PPP2R5BQ15173 497 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 NKX1-1Q15270 411 aaPredicted RBP15.88■□□□□ 0.13
CIITA-213ENST00000618327 ADCK5Q3MIX3 580 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
CIITA-213ENST00000618327 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
CIITA-213ENST00000618327 C3P01024 1663 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 HSPA1LP34931 641 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 TPCN1Q9ULQ1 816 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 TFAP4Q01664 338 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 ZNF274Q96GC6 653 aaPredicted RBP15.88■□□□□ 0.13
CIITA-213ENST00000618327 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
CIITA-213ENST00000618327 PPEF1O14829 653 aaPredicted RBP15.87■□□□□ 0.13
CIITA-213ENST00000618327 CYP21A2P08686 494 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 IDEP14735 1019 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 ADD2P35612 726 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 FAM173BQ6P4H8 233 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 TEKT1Q969V4 418 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
CIITA-213ENST00000618327 EIF5P55010 431 aaKnown RBP15.87■□□□□ 0.13
CIITA-213ENST00000618327 EIF6P56537 245 aaKnown RBP15.87■□□□□ 0.13
CIITA-213ENST00000618327 RBM6P78332 1123 aaKnown RBP15.87■□□□□ 0.13
CIITA-213ENST00000618327 OTUD7BQ6GQQ9 843 aa15.87■□□□□ 0.13
CIITA-213ENST00000618327 PHKBQ93100 1093 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms