RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 NCOA7Q8NI08 942 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
CNOT3-209ENST00000617930 CRAMP1Q96RY5 1269 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 ANKRD2Q9GZV1 360 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 HPS5Q9UPZ3 1129 aa20.63■□□□□ 0.89
CNOT3-209ENST00000617930 FIBPO43427 364 aa20.62■□□□□ 0.89
CNOT3-209ENST00000617930 MCM5P33992 734 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 LLPHQ9BRT6 129 aaKnown RBP20.61■□□□□ 0.89
CNOT3-209ENST00000617930 SENP2Q9HC62 589 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 LRP2BPQ9P2M1 347 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 NEDD4P46934 1319 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 MBD3O95983 291 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 FDPSP14324 419 aaKnown RBP20.61■□□□□ 0.89
CNOT3-209ENST00000617930 PDCP20941 246 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 NAP1L5Q96NT1 182 aaPredicted RBP20.61■□□□□ 0.89
CNOT3-209ENST00000617930 ABCF2Q9UG63 623 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 DUOX1Q9NRD9 1551 aa20.61■□□□□ 0.89
CNOT3-209ENST00000617930 PTPDC1A2A3K4 754 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 SMIM22K7EJ46 135 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 RAB11FIP4Q86YS3 637 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 MYH13Q9UKX3 1938 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 ANKIB1Q9P2G1 1089 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 ATP6V1DQ9Y5K8 247 aa20.6■□□□□ 0.89
CNOT3-209ENST00000617930 SYCE3A1L190 88 aa20.59■□□□□ 0.89
CNOT3-209ENST00000617930 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
CNOT3-209ENST00000617930 NAP1L2Q9ULW6 460 aaPredicted RBP20.59■□□□□ 0.89
CNOT3-209ENST00000617930 ZMYM6O95789 1325 aa20.59■□□□□ 0.89
CNOT3-209ENST00000617930 XDHP47989 1333 aa20.59■□□□□ 0.89
CNOT3-209ENST00000617930 B4E1Z4 1266 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 CYP7A1P22680 504 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 RESTQ13127 1097 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 TTC6Q86TZ1 520 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 POLLQ9UGP5 575 aa20.58■□□□□ 0.89
CNOT3-209ENST00000617930 KLF18A0A0U1RQI7 1052 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 BBOX1O75936 387 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 CHRNA5P30532 468 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.88
CNOT3-209ENST00000617930 PPP1R9BQ96SB3 815 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 RIOK1Q9BRS2 568 aaKnown RBP20.58■□□□□ 0.88
CNOT3-209ENST00000617930 JAG2Q9Y219 1238 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 SLC4A4Q9Y6R1 1079 aa20.58■□□□□ 0.88
CNOT3-209ENST00000617930 PPEF1O14829 653 aaPredicted RBP20.57■□□□□ 0.88
CNOT3-209ENST00000617930 RBSNQ9H1K0 784 aa20.57■□□□□ 0.88
CNOT3-209ENST00000617930 GNL3LQ9NVN8 582 aaKnown RBP20.57■□□□□ 0.88
CNOT3-209ENST00000617930 RAI14Q9P0K7 980 aa20.57■□□□□ 0.88
CNOT3-209ENST00000617930 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
CNOT3-209ENST00000617930 NPR1P16066 1061 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 HIBADHP31937 336 aaKnown RBP20.56■□□□□ 0.88
CNOT3-209ENST00000617930 FOSBP53539 338 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 IGDCC4Q8TDY8 1250 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 SDR42E1Q8WUS8 393 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 NAPBQ9H115 298 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 TFIP11Q9UBB9 837 aaKnown RBP20.56■□□□□ 0.88
CNOT3-209ENST00000617930 LEMD3Q9Y2U8 911 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 WDR19Q8NEZ3 1342 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
CNOT3-209ENST00000617930 VPS37DQ86XT2 251 aa20.56■□□□□ 0.88
CNOT3-209ENST00000617930 SH2B2O14492 632 aaPredicted RBP20.55■□□□□ 0.88
CNOT3-209ENST00000617930 UFL1O94874 794 aa20.55■□□□□ 0.88
CNOT3-209ENST00000617930 PDE6BP35913 854 aa20.55■□□□□ 0.88
CNOT3-209ENST00000617930 UBE2HP62256 183 aa20.55■□□□□ 0.88
CNOT3-209ENST00000617930 DYNLL1P63167 89 aaKnown RBP20.55■□□□□ 0.88
CNOT3-209ENST00000617930 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
CNOT3-209ENST00000617930 ADD1P35611 737 aaKnown RBP20.54■□□□□ 0.88
CNOT3-209ENST00000617930 C2CD5Q86YS7 1000 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 TBC1D16Q8TBP0 767 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 CHD4Q14839 1912 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 GOLGA8BA8MQT2 603 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 LRSAM1Q6UWE0 723 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 SP8Q8IXZ3 490 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 FAM184AQ8NB25 1140 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 MASTLQ96GX5 879 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
CNOT3-209ENST00000617930 TRDNQ13061 729 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
CNOT3-209ENST00000617930 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
CNOT3-209ENST00000617930 ANGEL1Q9UNK9 670 aaKnown RBP20.53■□□□□ 0.88
CNOT3-209ENST00000617930 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 MAGEB6P1A0A0J9YX57 407 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 GNAT2P19087 354 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
CNOT3-209ENST00000617930 GRIK5Q16478 980 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 AKNAD1Q5T1N1 836 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 LY9Q9HBG7 655 aa20.53■□□□□ 0.88
CNOT3-209ENST00000617930 KDM4AO75164 1064 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 RXRAP19793 462 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 PRDX5P30044 214 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 KRT85P78386 507 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 GUCY1B3Q02153 619 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 MECOMQ03112 1051 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 EVX2Q03828 476 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
CNOT3-209ENST00000617930 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 ZNF622Q969S3 477 aaKnown RBP eCLIP20.52■□□□□ 0.881e-6■□□□□ 9.8
CNOT3-209ENST00000617930 GJB4Q9NTQ9 266 aa20.52■□□□□ 0.88
CNOT3-209ENST00000617930 GGA1Q9UJY5 639 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms