RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TDO2P48775 406 aa9.22□□□□□ -0.93
NEK3-207ENST00000617054 CRY2Q49AN0 593 aa9.22□□□□□ -0.93
NEK3-207ENST00000617054 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
NEK3-207ENST00000617054 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
NEK3-207ENST00000617054 DDX49Q9Y6V7 483 aaKnown RBP9.22□□□□□ -0.93
NEK3-207ENST00000617054 LAMA4Q16363 1823 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 COL24A1Q17RW2 1714 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 ANKRD1Q15327 319 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 NAA16Q6N069 864 aaPredicted RBP9.21□□□□□ -0.93
NEK3-207ENST00000617054 MYL10Q9BUA6 226 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 LMBRD1Q9NUN5 540 aa9.21□□□□□ -0.93
NEK3-207ENST00000617054 MAGEB6P1A0A0J9YX57 407 aa9.21□□□□□ -0.94
NEK3-207ENST00000617054 CDC37L1Q7L3B6 337 aa9.21□□□□□ -0.94
NEK3-207ENST00000617054 RALYLQ86SE5 291 aaKnown RBP9.21□□□□□ -0.94
NEK3-207ENST00000617054 ZNF622Q969S3 477 aaKnown RBP eCLIP9.21□□□□□ -0.94
NEK3-207ENST00000617054 RBM17Q96I25 401 aaKnown RBP9.21□□□□□ -0.94
NEK3-207ENST00000617054 TCHHQ07283 1943 aa9.21□□□□□ -0.94
NEK3-207ENST00000617054 PRDM1O75626 825 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 PDIA3P30101 505 aaKnown RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 NLGN1Q8N2Q7 840 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 NCOA7Q8NI08 942 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 GTF3C6Q969F1 213 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 CHMP4CQ96CF2 233 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 CNPY2Q9Y2B0 182 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 CTDNEP1O95476 244 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 ZSCAN22P10073 491 aaPredicted RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 MB21D2Q8IYB1 491 aaPredicted RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 FBXW7Q969H0 707 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 GJB4Q9NTQ9 266 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 XDHP47989 1333 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 GOLGA6L22H0YM25 854 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 HMGB1P09429 215 aaKnown RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 RIOK1Q9BRS2 568 aaKnown RBP9.2□□□□□ -0.94
NEK3-207ENST00000617054 MXD3Q9BW11 206 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 ZSWIM5Q9P217 1185 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 MTMR6Q9Y217 621 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
NEK3-207ENST00000617054 ARAP2Q8WZ64 1704 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 IRS2Q9Y4H2 1338 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 KLF18A0A0U1RQI7 1052 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 CHRNA5P30532 468 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 MCM5P33992 734 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
NEK3-207ENST00000617054 TRDNQ13061 729 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 GPT2Q8TD30 523 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
NEK3-207ENST00000617054 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
NEK3-207ENST00000617054 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 OTUD7BQ6GQQ9 843 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
NEK3-207ENST00000617054 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 ALDH8A1Q9H2A2 487 aaPredicted RBP9.19□□□□□ -0.94
NEK3-207ENST00000617054 GGA1Q9UJY5 639 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 MYH13Q9UKX3 1938 aa9.19□□□□□ -0.94
NEK3-207ENST00000617054 UBE2Q2LH0YL09 131 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 FIBPO43427 364 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 F13A1P00488 732 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 SRGNP10124 158 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 USP48Q86UV5 1035 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 CCDC82Q8N4S0 544 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 A0A1B0GUL6 1792 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
NEK3-207ENST00000617054 CYP2D6P10635 497 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 ADD1P35611 737 aaKnown RBP9.18□□□□□ -0.94
NEK3-207ENST00000617054 CLEC17AQ6ZS10 378 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 DZIP1Q86YF9 867 aaKnown RBP9.18□□□□□ -0.94
NEK3-207ENST00000617054 CMTR1Q8N1G2 835 aaKnown RBP9.18□□□□□ -0.94
NEK3-207ENST00000617054 CAMKK2Q96RR4 588 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 CD209Q9NNX6 404 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 KCNQ5Q9NR82 932 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
NEK3-207ENST00000617054 LEMD3Q9Y2U8 911 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 GOLGA8BA8MQT2 603 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 USP17L21D6R901 530 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 SLC15A2Q16348 729 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 MICU3Q86XE3 530 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 TICAM2Q86XR7 235 aa9.18□□□□□ -0.94
NEK3-207ENST00000617054 PTPDC1A2A3K4 754 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 PFKFB2O60825 505 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 BBOX1O75936 387 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 MFSD6Q6ZSS7 791 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 NSUN7Q8NE18 718 aaKnown RBP9.17□□□□□ -0.94
NEK3-207ENST00000617054 BRIP1Q9BX63 1249 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 AGXT2Q9BYV1 514 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 NACAP1Q9BZK3 213 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 HPS5Q9UPZ3 1129 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 BAZ2AQ9UIF9 1905 aaKnown RBP9.17□□□□□ -0.94
NEK3-207ENST00000617054 CEBPZQ03701 1054 aaKnown RBP9.17□□□□□ -0.94
NEK3-207ENST00000617054 PPARAQ07869 468 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 AKNAD1Q5T1N1 836 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 GAS2L3Q86XJ1 694 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
NEK3-207ENST00000617054 TDRD7Q8NHU6 1098 aaKnown RBP9.17□□□□□ -0.94
NEK3-207ENST00000617054 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms