RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 CERS3Q8IU89 383 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 TIGD1Q96MW7 591 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 BTAF1O14981 1849 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 UQCRFS1P1P0C7P4 283 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 UBE3CQ15386 1083 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 CYB5R4Q7L1T6 521 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 ADGRA1Q86SQ6 560 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 TACC3Q9Y6A5 838 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 NEDD4P46934 1319 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
PCDHGA9-202ENST00000616887 MYH7P12883 1935 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 H3BQV1 296 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 KRT85P78386 507 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 RESTQ13127 1097 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 GIMAP6Q6P9H5 292 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 STRBPQ96SI9 672 aaKnown RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 KLF18A0A0U1RQI7 1052 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 LIG1P18858 919 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 CLEC4GQ6UXB4 293 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
PCDHGA9-202ENST00000616887 ERICH4A6NGS2 130 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 B4E1Z4 1266 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 KDM4AO75164 1064 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 CTDSPL2Q05D32 466 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 PYCARDQ9ULZ3 195 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 SALL1Q9NSC2 1324 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 TERF2Q15554 542 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 ZSCAN25Q6NSZ9 544 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 SYAP1Q96A49 352 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
PCDHGA9-202ENST00000616887 APBA3O96018 575 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 JAG2Q9Y219 1238 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CAPN2P17655 700 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 SLC20A2Q08357 652 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CAMK4Q16566 473 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 UVSSAQ2YD98 709 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 LEO1Q8WVC0 666 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 MYL10Q9BUA6 226 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 DDX41Q9UJV9 622 aaKnown RBP13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
PCDHGA9-202ENST00000616887 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 TRERF1Q96PN7 1200 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 LRP2BPQ9P2M1 347 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 SF3B3Q15393 1217 aaKnown RBP13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 IFNL3Q8IZI9 196 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 LY75O60449 1722 aa13.29□□□□□ -0.28
PCDHGA9-202ENST00000616887 GSG1L2A8MUP6 293 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 ZPR1O75312 459 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 LLPHQ9BRT6 129 aaKnown RBP13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 TFCP2L1Q9NZI6 479 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 LAMB2P55268 1798 aa13.28□□□□□ -0.28
PCDHGA9-202ENST00000616887 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms