RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 MXD3Q9BW11 206 aa13.94□□□□□ -0.18
TARDBP-217ENST00000616545 LSG1Q9H089 658 aaKnown RBP13.94□□□□□ -0.18
TARDBP-217ENST00000616545 DAGLAQ9Y4D2 1042 aa13.94□□□□□ -0.18
TARDBP-217ENST00000616545 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
TARDBP-217ENST00000616545 H7C1D1 291 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 CHGBP05060 677 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 SCNN1DP51172 638 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 SLFNL1Q499Z3 407 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 RNF20Q5VTR2 975 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
TARDBP-217ENST00000616545 TAOK2Q9UL54 1235 aa13.93□□□□□ -0.18
TARDBP-217ENST00000616545 ZNF541Q9H0D2 1346 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 MYO1BO43795 1136 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 SEC24BO95487 1268 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 RBM25P49756 843 aaKnown RBP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 GMPSP49915 693 aaPredicted RBP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 ANAPC15P60006 121 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 CFAP100Q494V2 611 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 APOBEC3HQ6NTF7 200 aaKnown RBP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 CCDC129Q6ZRS4 1044 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 LCORLQ8N3X6 602 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 IL25Q9H293 177 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 ARMT1Q9H993 441 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
TARDBP-217ENST00000616545 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
TARDBP-217ENST00000616545 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
TARDBP-217ENST00000616545 LMOD1P29536 600 aaPredicted RBP13.91□□□□□ -0.18
TARDBP-217ENST00000616545 HSPA4P34932 840 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 RHBDL3P58872 404 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
TARDBP-217ENST00000616545 C22orf23Q9BZE7 217 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 MYOZ2Q9NPC6 264 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 TMOD2Q9NZR1 351 aa13.91□□□□□ -0.18
TARDBP-217ENST00000616545 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 APPP05067 770 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 USP5P45974 858 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 NT5C2P49902 561 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
TARDBP-217ENST00000616545 PTH1RQ03431 593 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 TSGA10IPQ3SY00 556 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 KCNB2Q92953 911 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
TARDBP-217ENST00000616545 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 NAPBQ9H115 298 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
TARDBP-217ENST00000616545 RBM8AQ9Y5S9 174 aaKnown RBP13.9□□□□□ -0.18
TARDBP-217ENST00000616545 FGAP02671 866 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 PCP11498 1178 aaKnown RBP13.89□□□□□ -0.19
TARDBP-217ENST00000616545 KRT32Q14532 448 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
TARDBP-217ENST00000616545 SBK1Q52WX2 424 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 VPS53Q5VIR6 699 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 CDC42EP5Q6NZY7 148 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 SH3RF3Q8TEJ3 882 aaPredicted RBP13.89□□□□□ -0.19
TARDBP-217ENST00000616545 TBC1D32Q96NH3 1257 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
TARDBP-217ENST00000616545 TIAM2Q8IVF5 1701 aa13.89□□□□□ -0.19
TARDBP-217ENST00000616545 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
TARDBP-217ENST00000616545 ZNF213O14771 459 aa13.88□□□□□ -0.19
TARDBP-217ENST00000616545 ENTPD3O75355 529 aa13.88□□□□□ -0.19
TARDBP-217ENST00000616545 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-217ENST00000616545 TDO2P48775 406 aa13.88□□□□□ -0.19
TARDBP-217ENST00000616545 PRMT6Q96LA8 375 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-217ENST00000616545 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
TARDBP-217ENST00000616545 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-217ENST00000616545 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
TARDBP-217ENST00000616545 WNT10BO00744 389 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 FOXP2O15409 715 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 PRKAB2O43741 272 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-217ENST00000616545 SLC3A2P08195 630 aaKnown RBP13.87□□□□□ -0.19
TARDBP-217ENST00000616545 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 CREB3L3Q68CJ9 461 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 ADARB2Q9NS39 739 aaKnown RBP13.87□□□□□ -0.19
TARDBP-217ENST00000616545 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
TARDBP-217ENST00000616545 PSMA5P28066 241 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 TNNI2P48788 182 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 KIF4BQ2VIQ3 1234 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 FAM83AQ86UY5 434 aa13.86□□□□□ -0.19
TARDBP-217ENST00000616545 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms