RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
MMP28-204ENST00000615136 SDR42E1Q8WUS8 393 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 MYH13Q9UKX3 1938 aa22.46■■□□□ 1.19
MMP28-204ENST00000615136 CHD4Q14839 1912 aa22.45■■□□□ 1.18
MMP28-204ENST00000615136 ELP1O95163 1332 aa22.45■■□□□ 1.18
MMP28-204ENST00000615136 FDPSP14324 419 aaKnown RBP22.45■■□□□ 1.18
MMP28-204ENST00000615136 DYNLL1P63167 89 aaKnown RBP22.45■■□□□ 1.18
MMP28-204ENST00000615136 TRDNQ13061 729 aa22.45■■□□□ 1.18
MMP28-204ENST00000615136 STK11IPQ8N1F8 1099 aa22.45■■□□□ 1.18
MMP28-204ENST00000615136 GPR101Q96P66 508 aaPredicted RBP22.45■■□□□ 1.18
MMP28-204ENST00000615136 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
MMP28-204ENST00000615136 GOLGA8BA8MQT2 603 aa22.44■■□□□ 1.18
MMP28-204ENST00000615136 KRT85P78386 507 aa22.44■■□□□ 1.18
MMP28-204ENST00000615136 TIAM2Q8IVF5 1701 aa22.44■■□□□ 1.18
MMP28-204ENST00000615136 WDR19Q8NEZ3 1342 aa22.44■■□□□ 1.18
MMP28-204ENST00000615136 TDO2P48775 406 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 RESTQ13127 1097 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 ZNF827Q17R98 1081 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 ANO8Q9HCE9 1232 aaPredicted RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 SH2B2O14492 632 aaPredicted RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 UVSSAQ2YD98 709 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 ZNF772Q68DY9 489 aaPredicted RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 TTC6Q86TZ1 520 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
MMP28-204ENST00000615136 NOL7Q9UMY1 257 aaKnown RBP22.43■■□□□ 1.18
MMP28-204ENST00000615136 GNAT2P19087 354 aa22.42■■□□□ 1.18
MMP28-204ENST00000615136 RBM6P78332 1123 aaKnown RBP22.42■■□□□ 1.18
MMP28-204ENST00000615136 TFIP11Q9UBB9 837 aaKnown RBP22.42■■□□□ 1.18
MMP28-204ENST00000615136 KDM4AO75164 1064 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 RXRAP19793 462 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 PRDX5P30044 214 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 CRY2Q49AN0 593 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 IGDCC4Q8TDY8 1250 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 NSUN4Q96CB9 384 aaKnown RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 ZSWIM5Q9P217 1185 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 H3BQV1 296 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 POLRMTO00411 1230 aaKnown RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 SEMA3EO15041 775 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 MSNP26038 577 aaKnown RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 HMGN5P82970 282 aaKnown RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 MECOMQ03112 1051 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 AKNAD1Q5T1N1 836 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 IFFO2Q5TF58 517 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 NAA16Q6N069 864 aaPredicted RBP22.41■■□□□ 1.18
MMP28-204ENST00000615136 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 MYH15Q9Y2K3 1946 aa22.41■■□□□ 1.18
MMP28-204ENST00000615136 GUCY1B3Q02153 619 aa22.4■■□□□ 1.18
MMP28-204ENST00000615136 RPGRQ92834 1020 aaKnown RBP22.4■■□□□ 1.18
MMP28-204ENST00000615136 NACAP1Q9BZK3 213 aa22.4■■□□□ 1.18
MMP28-204ENST00000615136 BAZ2AQ9UIF9 1905 aaKnown RBP22.39■■□□□ 1.18
MMP28-204ENST00000615136 ST5P78524 1137 aa22.39■■□□□ 1.17
MMP28-204ENST00000615136 GPSM2P81274 684 aa22.39■■□□□ 1.17
MMP28-204ENST00000615136 LY9Q9HBG7 655 aa22.39■■□□□ 1.17
MMP28-204ENST00000615136 CYP2D7A0A087X1C5 515 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 RRP12Q5JTH9 1297 aaKnown RBP22.38■■□□□ 1.17
MMP28-204ENST00000615136 STAG1Q8WVM7 1258 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 SCAND2PQ9GZW5 306 aaPredicted RBP22.38■■□□□ 1.17
MMP28-204ENST00000615136 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.38■■□□□ 1.17
MMP28-204ENST00000615136 CCDC39Q9UFE4 941 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 PDS5AQ29RF7 1337 aaKnown RBP22.38■■□□□ 1.17
MMP28-204ENST00000615136 EVX2Q03828 476 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 PPARAQ07869 468 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 OTUD7BQ6GQQ9 843 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 MFSD6Q6ZSS7 791 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 ZKSCAN3Q9BRR0 538 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 MYL10Q9BUA6 226 aa22.38■■□□□ 1.17
MMP28-204ENST00000615136 MINDY4BA8MYZ0 360 aa22.37■■□□□ 1.17
MMP28-204ENST00000615136 ADD1P35611 737 aaKnown RBP22.37■■□□□ 1.17
MMP28-204ENST00000615136 APOA5Q6Q788 366 aa22.37■■□□□ 1.17
MMP28-204ENST00000615136 GJB4Q9NTQ9 266 aa22.37■■□□□ 1.17
MMP28-204ENST00000615136 XDHP47989 1333 aa22.37■■□□□ 1.17
MMP28-204ENST00000615136 APBA3O96018 575 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 COL23A1Q86Y22 540 aaPredicted RBP22.36■■□□□ 1.17
MMP28-204ENST00000615136 CCDC144CPQ8IYA2 1237 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 TOMM22Q9NS69 142 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 ZKSCAN5Q9Y2L8 839 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 LEMD3Q9Y2U8 911 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 CDC27P30260 824 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 GRIK5Q16478 980 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 TMEM67Q5HYA8 995 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 TMEM87BQ96K49 555 aa22.36■■□□□ 1.17
MMP28-204ENST00000615136 AATFQ9NY61 560 aaKnown RBP eCLIP22.36■■□□□ 1.17
MMP28-204ENST00000615136 ZNF500O60304 480 aaPredicted RBP22.35■■□□□ 1.17
MMP28-204ENST00000615136 ILDR1Q86SU0 546 aaPredicted RBP22.35■■□□□ 1.17
MMP28-204ENST00000615136 MICU3Q86XE3 530 aa22.35■■□□□ 1.17
MMP28-204ENST00000615136 LEO1Q8WVC0 666 aaPredicted RBP22.35■■□□□ 1.17
MMP28-204ENST00000615136 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
MMP28-204ENST00000615136 IFIT3O14879 490 aaKnown RBP22.35■■□□□ 1.17
MMP28-204ENST00000615136 NAP1L5Q96NT1 182 aaPredicted RBP22.35■■□□□ 1.17
MMP28-204ENST00000615136 FTOQ9C0B1 505 aaKnown RBP eCLIP22.35■■□□□ 1.17
MMP28-204ENST00000615136 METAP2P50579 478 aaKnown RBP eCLIP22.34■■□□□ 1.17
MMP28-204ENST00000615136 GIMAP6Q6P9H5 292 aa22.34■■□□□ 1.17
MMP28-204ENST00000615136 SGMS1Q86VZ5 419 aa22.34■■□□□ 1.17
MMP28-204ENST00000615136 TDRD7Q8NHU6 1098 aaKnown RBP22.34■■□□□ 1.17
MMP28-204ENST00000615136 KRT23Q9C075 422 aa22.34■■□□□ 1.17
MMP28-204ENST00000615136 CNNM2Q9H8M5 875 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms