RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RHPN1Q8TCX5 695 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 MASTLQ96GX5 879 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 CDC5LQ99459 802 aaKnown RBP25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 MPHOSPH8Q99549 860 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 DNAJC25Q9H1X3 360 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 RTL9Q8NET4 1388 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 IGHMBP2P38935 993 aaKnown RBP25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 RPS8P62241 208 aaKnown RBP25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 CCZ1BP86790 482 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 CCZ1P86791 482 aaPredicted RBP25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 COPRSQ9NQ92 184 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 ZNF446Q9NWS9 450 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 GRAPQ13588 217 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 TEX35Q5T0J7 233 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 CDC37L1Q7L3B6 337 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 GRAPLQ8TC17 118 aaPredicted RBP25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 CNNM1Q9NRU3 951 aa25.48■■□□□ 1.67
POLR2J3-220ENST00000613744 ATP8B1O43520 1251 aa25.47■■□□□ 1.67
POLR2J3-220ENST00000613744 ZKSCAN1P17029 563 aaPredicted RBP25.47■■□□□ 1.67
POLR2J3-220ENST00000613744 NLGN2Q8NFZ4 835 aa25.47■■□□□ 1.67
POLR2J3-220ENST00000613744 LARP6Q9BRS8 491 aaKnown RBP25.47■■□□□ 1.67
POLR2J3-220ENST00000613744 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.47■■□□□ 1.67
POLR2J3-220ENST00000613744 CCDC69A6NI79 296 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 USP27XA6NNY8 438 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 GLRX3O76003 335 aaKnown RBP25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 CAPN2P17655 700 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 PSMA5P28066 241 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 HOXA10P31260 410 aaPredicted RBP25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 FHDC1Q9C0D6 1143 aaPredicted RBP25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 IMPACTQ9P2X3 320 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 ZNF219Q9P2Y4 722 aaPredicted RBP25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 ERICH4A6NGS2 130 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 KCNA3P22001 575 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 STX1AQ16623 288 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 KIF13BQ9NQT8 1826 aa25.46■■□□□ 1.67
POLR2J3-220ENST00000613744 MUM1L1Q5H9M0 696 aa25.45■■□□□ 1.66
POLR2J3-220ENST00000613744 ATG9AQ7Z3C6 839 aa25.45■■□□□ 1.66
POLR2J3-220ENST00000613744 HELBQ8NG08 1087 aaPredicted RBP25.45■■□□□ 1.66
POLR2J3-220ENST00000613744 FHOD1Q9Y613 1164 aa25.45■■□□□ 1.66
POLR2J3-220ENST00000613744 CACNA1SQ13698 1873 aa25.45■■□□□ 1.66
POLR2J3-220ENST00000613744 VGLL3A8MV65 326 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 EYA2O00167 538 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 SASH1O94885 1247 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 TPM4P67936 248 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 NECTIN1Q15223 517 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 CWC27Q6UX04 472 aaKnown RBP25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 OLFM4Q6UX06 510 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 FILIP1Q7Z7B0 1213 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 ERC1Q8IUD2 1116 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 CRAMP1Q96RY5 1269 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 CD2APQ9Y5K6 639 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 TXLNBQ8N3L3 684 aa25.44■■□□□ 1.66
POLR2J3-220ENST00000613744 CPA1P15085 419 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 TGFB2P61812 414 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 CCDC93Q567U6 631 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 BICD2Q8TD16 824 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 OSBPL5Q9H0X9 879 aaPredicted RBP25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 ARGLU1Q9NWB6 273 aaPredicted RBP25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 NR1I2O75469 434 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 ALDH1B1P30837 517 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 ADCK5Q3MIX3 580 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 STYK1Q6J9G0 422 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 RIPOR2Q9Y4F9 1068 aa25.43■■□□□ 1.66
POLR2J3-220ENST00000613744 HNRNPH2P55795 449 aaKnown RBP25.42■■□□□ 1.66
POLR2J3-220ENST00000613744 PRPF40BQ6NWY9 871 aaKnown RBP25.42■■□□□ 1.66
POLR2J3-220ENST00000613744 BSDC1Q9NW68 430 aaPredicted RBP25.42■■□□□ 1.66
POLR2J3-220ENST00000613744 TPCN1Q9ULQ1 816 aa25.42■■□□□ 1.66
POLR2J3-220ENST00000613744 TAF5LO75529 589 aa25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 TFCP2Q12800 502 aa25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 UTRNP46939 3433 aa25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 PPEF1O14829 653 aaPredicted RBP25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 SNW1Q13573 536 aaKnown RBP25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 V9GYY5 206 aaPredicted RBP25.41■■□□□ 1.66
POLR2J3-220ENST00000613744 WTIPA6NIX2 430 aaPredicted RBP25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 SNAP23O00161 211 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 MAP4K4O95819 1239 aaPredicted RBP25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 PNMA6AP0CW24 399 aaPredicted RBP25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 METTL24Q5JXM2 366 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 CLASRPQ8N2M8 674 aaKnown RBP25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 PGBD1Q96JS3 809 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 MINPP1Q9UNW1 487 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 HIP1O00291 1037 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 CLCN6P51797 869 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 CHRNDQ07001 517 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 FERMT3Q86UX7 667 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 NECAB1Q8N987 351 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 CNKSR1Q969H4 720 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 CFAP45Q9UL16 551 aa25.4■■□□□ 1.66
POLR2J3-220ENST00000613744 SLX4Q8IY92 1834 aa25.39■■□□□ 1.66
POLR2J3-220ENST00000613744 BBOX1O75936 387 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 CIAO1O76071 339 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 ZRANB2O95218 330 aaKnown RBP eCLIP25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 TPM1P09493 284 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 IL15P40933 162 aaPredicted RBP25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 PTH1RQ03431 593 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 CCDC150Q8NCX0 1101 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 SRRTQ9BXP5 876 aaKnown RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms